RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 CLCN6P51797 869 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 ECT2LQ008S8 904 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 EIF4HQ15056 248 aaKnown RBP20.86■□□□□ 0.93
PNKP-215ENST00000600910 TMEM196Q5HYL7 178 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 CCDC137Q6PK04 289 aaKnown RBP20.86■□□□□ 0.93
PNKP-215ENST00000600910 CYB5D2Q8WUJ1 264 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 HTR3CQ8WXA8 447 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 SEPT10Q9P0V9 454 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 UBA2Q9UBT2 640 aaPredicted RBP20.86■□□□□ 0.93
PNKP-215ENST00000600910 KCNN4O15554 427 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 CD160O95971 181 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 MT-CO1P00395 513 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 ATP5BP06576 529 aaKnown RBP20.86■□□□□ 0.93
PNKP-215ENST00000600910 ITGAVP06756 1048 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 CD72P21854 359 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 CHRNA3P32297 505 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 STK19P49842 368 aaPredicted RBP20.86■□□□□ 0.93
PNKP-215ENST00000600910 FAM182AQ5T1J6 154 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 FSTL4Q6MZW2 842 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 KLHL7Q8IXQ5 586 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 EZH1Q92800 747 aaPredicted RBP20.86■□□□□ 0.93
PNKP-215ENST00000600910 FATE1Q969F0 183 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 CCDC114Q96M63 670 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 USP29Q9HBJ7 922 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 RRAGDQ9NQL2 400 aaPredicted RBP20.86■□□□□ 0.93
PNKP-215ENST00000600910 SLC25A13Q9UJS0 675 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 ERVW-1Q9UQF0 538 aa20.86■□□□□ 0.93
PNKP-215ENST00000600910 DRG1Q9Y295 367 aaKnown RBP20.86■□□□□ 0.93
PNKP-215ENST00000600910 F5P12259 2224 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 K7EQS6 105 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 MAN2B1O00754 1011 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 TIMM44O43615 452 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 ASLP04424 464 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 DLDP09622 509 aaKnown RBP20.85■□□□□ 0.93
PNKP-215ENST00000600910 CCNB1P14635 433 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 FNTAP49354 379 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 GDF10P55107 478 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 PRKCQQ04759 706 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 SLC10A7Q0GE19 358 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 GRSF1Q12849 480 aaKnown RBP eCLIP20.85■□□□□ 0.93
PNKP-215ENST00000600910 CCDC105Q8IYK2 499 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 CEP112Q8N8E3 955 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 MNS1Q8NEH6 495 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 NSMCE1Q8WV22 266 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 MAML1Q92585 1016 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 ZNF599Q96NL3 588 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 CARD6Q9BX69 1037 aa20.85■□□□□ 0.93
PNKP-215ENST00000600910 CXorf51AA0A1B0GTR3 108 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 KRBA1A5PL33 1030 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 ANTXRLA6NF34 631 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 K7ERQ8 282 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 SGK1O00141 431 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 EGFP01133 1207 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 DRD1P21728 446 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 TNFRSF4P43489 277 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 SERPINH1P50454 418 aaKnown RBP20.84■□□□□ 0.93
PNKP-215ENST00000600910 NRLP54845 237 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 GEMIN4P57678 1058 aaKnown RBP20.84■□□□□ 0.93
PNKP-215ENST00000600910 ZBTB17Q13105 803 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 HNRNPDQ14103 355 aaKnown RBP20.84■□□□□ 0.93
PNKP-215ENST00000600910 LBRQ14739 615 aaKnown RBP20.84■□□□□ 0.93
PNKP-215ENST00000600910 PTPRNQ16849 979 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 TMCO4Q5TGY1 634 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 ZNF852Q6ZMS4 543 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 FAM71DQ8N9W8 422 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 ATP11CQ8NB49 1132 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 ATL2Q8NHH9 583 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 USP33Q8TEY7 942 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 ZNF419Q96HQ0 510 aaPredicted RBP20.84■□□□□ 0.93
PNKP-215ENST00000600910 MRGPRX3Q96LB0 322 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 FERMT1Q9BQL6 677 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 CEP41Q9BYV8 373 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 HS3ST2Q9Y278 367 aa20.84■□□□□ 0.93
PNKP-215ENST00000600910 CTAGE15A4D2H0 777 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 CFAP69A5D8W1 941 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 MTSS1O43312 755 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 CTAGE8P0CG41 777 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 STIP1P31948 543 aaKnown RBP20.83■□□□□ 0.93
PNKP-215ENST00000600910 IFI35P80217 286 aaPredicted RBP20.83■□□□□ 0.93
PNKP-215ENST00000600910 SLC20A2Q08357 652 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 WASHC5Q12768 1159 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 RFTN1Q14699 578 aaPredicted RBP20.83■□□□□ 0.93
PNKP-215ENST00000600910 INO80DQ53TQ3 878 aaPredicted RBP20.83■□□□□ 0.93
PNKP-215ENST00000600910 MARC1Q5VT66 337 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 CTAGE6Q86UF2 777 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 CTAGE4Q8IX94 777 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 SH2D3CQ8N5H7 860 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 UCMAQ8WVF2 138 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 UHRF1Q96T88 793 aaPredicted RBP20.83■□□□□ 0.93
PNKP-215ENST00000600910 KRT12Q99456 494 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 SLCO3A1Q9UIG8 710 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 PLA2G4CQ9UP65 541 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 FCF1Q9Y324 198 aaKnown RBP20.83■□□□□ 0.93
PNKP-215ENST00000600910 STARD13Q9Y3M8 1113 aa20.83■□□□□ 0.93
PNKP-215ENST00000600910 RNF103O00237 685 aa20.82■□□□□ 0.92
PNKP-215ENST00000600910 SMAD6O43541 496 aaKnown RBP20.82■□□□□ 0.92
PNKP-215ENST00000600910 ZNF189O75820 626 aaPredicted RBP20.82■□□□□ 0.92
PNKP-215ENST00000600910 TMCC1O94876 653 aa20.82■□□□□ 0.92
PNKP-215ENST00000600910 JCHAINP01591 159 aa20.82■□□□□ 0.92
PNKP-215ENST00000600910 SRPRAP08240 638 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms