RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 FOCADQ5VW36 1801 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 SBF2Q86WG5 1849 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 TCAF2A6NFQ2 919 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 ZBBXA8MT70 800 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 PSMD11O00231 422 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 PHGDHO43175 533 aaKnown RBP16.37■□□□□ 0.21
SYDE1-204ENST00000600440 CYP2C9P11712 490 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 MATN1P21941 496 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 YWHAEP62258 255 aaKnown RBP16.37■□□□□ 0.21
SYDE1-204ENST00000600440 RHDQ02161 417 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 ZNF699Q32M78 642 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 FAM47CQ5HY64 1035 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 SLC27A3Q5K4L6 730 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 CADM3Q8N126 398 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 PARP8Q8N3A8 854 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 PCDH19Q8TAB3 1148 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 TRPC4APQ8TEL6 797 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 PBXIP1Q96AQ6 731 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 OMDQ99983 421 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 FANCEQ9HB96 536 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 NMRAL1Q9HBL8 299 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 SYBUQ9NX95 663 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 SUN2Q9UH99 717 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 GNPTGQ9UJJ9 305 aa16.37■□□□□ 0.21
SYDE1-204ENST00000600440 C9JVG2 144 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 RPS6KA4O75676 772 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 TKTP29401 623 aaKnown RBP16.36■□□□□ 0.21
SYDE1-204ENST00000600440 GARSP41250 739 aaKnown RBP16.36■□□□□ 0.21
SYDE1-204ENST00000600440 ZIK1Q3SY52 487 aaPredicted RBP16.36■□□□□ 0.21
SYDE1-204ENST00000600440 TIFABQ6ZNK6 161 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 IFNEQ86WN2 208 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 SAMD3Q8N6K7 520 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 PDZD8Q8NEN9 1154 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 ACVR1CQ8NER5 493 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 TFAP2CQ92754 450 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 CGRRF1Q99675 332 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 NIF3L1Q9GZT8 377 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 SLC39A10Q9ULF5 831 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 PCDHGC3Q9UN70 934 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 MFHAS1Q9Y4C4 1052 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 POLRMTO00411 1230 aaKnown RBP16.36■□□□□ 0.21
SYDE1-204ENST00000600440 KPNA4O00629 521 aaPredicted RBP16.36■□□□□ 0.21
SYDE1-204ENST00000600440 CNTFP26441 200 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 HEATR6Q6AI08 1181 aaKnown RBP16.36■□□□□ 0.21
SYDE1-204ENST00000600440 ACMSDQ8TDX5 336 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 TMEM174Q8WUU8 243 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 ZNF669Q96BR6 464 aaPredicted RBP16.36■□□□□ 0.21
SYDE1-204ENST00000600440 LRRC39Q96DD0 335 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 UPF3AQ9H1J1 476 aaKnown RBP16.36■□□□□ 0.21
SYDE1-204ENST00000600440 ZBTB26Q9HCK0 441 aa16.36■□□□□ 0.21
SYDE1-204ENST00000600440 OPRL1P41146 370 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 GSSP48637 474 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 ZNF132P52740 706 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 CCDC153Q494R4 210 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 DEPDC1Q5TB30 811 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 DSG4Q86SJ6 1040 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 GLIS2Q9BZE0 524 aaPredicted RBP16.35■□□□□ 0.21
SYDE1-204ENST00000600440 GBA3Q9H227 469 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 FAM49BQ9NUQ9 324 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 HESX1Q9UBX0 185 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 STRCP1A6NGW2 1772 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 G3V2L1 256 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 MYO1DO94832 1006 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 SLC7A2P52569 658 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 MERTKQ12866 999 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 TMEM132AQ24JP5 1023 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 OR9I1Q8NGQ6 314 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 MAGEE2Q8TD90 523 aaPredicted RBP16.35■□□□□ 0.21
SYDE1-204ENST00000600440 CHURC1Q8WUH1 139 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 DGCR6LQ9BY27 220 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 TUBA8Q9NY65 449 aaPredicted RBP16.35■□□□□ 0.21
SYDE1-204ENST00000600440 HMGXB4Q9UGU5 601 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 ATP11BQ9Y2G3 1177 aa16.35■□□□□ 0.21
SYDE1-204ENST00000600440 SOBPA7XYQ1 873 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 ASS1P00966 412 aaKnown RBP16.34■□□□□ 0.21
SYDE1-204ENST00000600440 S100A1P23297 94 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
SYDE1-204ENST00000600440 IDUAP35475 653 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 CREB5Q02930 508 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 C15orf52Q6ZUT6 534 aaKnown RBP16.34■□□□□ 0.21
SYDE1-204ENST00000600440 RPS27LQ71UM5 84 aaKnown RBP16.34■□□□□ 0.21
SYDE1-204ENST00000600440 DHFR2Q86XF0 187 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 TNIP2Q8NFZ5 429 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 LGMNQ99538 433 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 BEGAINQ9BUH8 593 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 ADNPQ9H2P0 1102 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 EPS8L2Q9H6S3 715 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.34■□□□□ 0.215e-9■■■□□ 18
SYDE1-204ENST00000600440 PCDHGA7Q9Y5G6 932 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 DYNC1LI2O43237 492 aaPredicted RBP16.34■□□□□ 0.21
SYDE1-204ENST00000600440 GRID2O43424 1007 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 MAN1A2O60476 641 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 C2P06681 752 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 INHBBP09529 407 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 HNRNPLP14866 589 aaKnown RBP eCLIP16.34■□□□□ 0.21
SYDE1-204ENST00000600440 TAZQ16635 292 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 FSTL4Q6MZW2 842 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 PIGZQ86VD9 579 aa16.34■□□□□ 0.21
SYDE1-204ENST00000600440 SPPL2CQ8IUH8 684 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms