RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 AASDHQ4L235 1098 aaPredicted RBP16.56■□□□□ 0.24
LSM4-206ENST00000600289 ERMARDQ5T6L9 678 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 RWDD4Q6NW29 188 aaKnown RBP16.56■□□□□ 0.24
LSM4-206ENST00000600289 USP30Q70CQ3 517 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 GAS2L3Q86XJ1 694 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 PYROXD2Q8N2H3 581 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 RTL3Q8N8U3 475 aaKnown RBP16.56■□□□□ 0.24
LSM4-206ENST00000600289 GATA6Q92908 595 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 PEBP4Q96S96 227 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 PCED1AQ9H1Q7 454 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 MAGEH1Q9H213 219 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 ARRDC1-AS1Q9H2J1 176 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 CD93Q9NPY3 652 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 WSB2Q9NYS7 404 aaPredicted RBP16.56■□□□□ 0.24
LSM4-206ENST00000600289 UVRAGQ9P2Y5 699 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 IP6K2Q9UHH9 426 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 LCMT1Q9UIC8 334 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 AP4E1Q9UPM8 1137 aa16.56■□□□□ 0.24
LSM4-206ENST00000600289 PRPSAP2O60256 369 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 RNASEH1O60930 286 aaKnown RBP16.55■□□□□ 0.24
LSM4-206ENST00000600289 DNTTP04053 509 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 ZNF806P0C7X5 589 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 SRCP12931 536 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 SPINK2P20155 84 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 RPL6Q02878 288 aaKnown RBP16.55■□□□□ 0.24
LSM4-206ENST00000600289 SLC20A2Q08357 652 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 SFSWAPQ12872 951 aaKnown RBP16.55■□□□□ 0.24
LSM4-206ENST00000600289 TTC31Q49AM3 519 aaPredicted RBP16.55■□□□□ 0.24
LSM4-206ENST00000600289 PSAPL1Q6NUJ1 521 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 RETSATQ6NUM9 610 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 TC2NQ8N9U0 490 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 CADM4Q8NFZ8 388 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 OR7D4Q8NG98 312 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 ARHGEF26Q96DR7 871 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 ERLEC1Q96DZ1 483 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 ZNF419Q96HQ0 510 aaPredicted RBP16.55■□□□□ 0.24
LSM4-206ENST00000600289 FAM129BQ96TA1 746 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 CHP1Q99653 195 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 SNRNP25Q9BV90 132 aaKnown RBP16.55■□□□□ 0.24
LSM4-206ENST00000600289 NUP85Q9BW27 656 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 DEF6Q9H4E7 631 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 MTG2Q9H4K7 406 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 CATSPERBQ9H7T0 1116 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 NHEJ1Q9H9Q4 299 aaPredicted RBP16.55■□□□□ 0.24
LSM4-206ENST00000600289 VPS45Q9NRW7 570 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 NDFIP2Q9NV92 336 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 DONSONQ9NYP3 566 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 ANAPC7Q9UJX3 599 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 PCDH15Q96QU1 1955 aa16.55■□□□□ 0.24
LSM4-206ENST00000600289 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 AKR1B10O60218 316 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 SNAP91O60641 907 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 RAMP2O60895 175 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 ADH1BP00325 375 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 H2AFZP0C0S5 128 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 TMEM253P0C7T8 217 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 EPHB2P29323 1055 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 YBEYP58557 167 aaPredicted RBP16.54■□□□□ 0.24
LSM4-206ENST00000600289 DLG2Q15700 870 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 CST6Q15828 149 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 STPG1Q5TH74 334 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 H2AFVQ71UI9 128 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 CYP2U1Q7Z449 544 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 TMEFF1Q8IYR6 380 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 UMODL1-AS1Q8N2C9 162 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 TEKT4Q8WW24 435 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 CTNNBL1Q8WYA6 563 aaPredicted RBP16.54■□□□□ 0.24
LSM4-206ENST00000600289 FOXJ1Q92949 421 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 ARHGEF2Q92974 986 aaKnown RBP16.54■□□□□ 0.24
LSM4-206ENST00000600289 FAM131CQ96AQ9 280 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 CCDC42Q96M95 316 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 ANP32EQ9BTT0 268 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 CEP44Q9C0F1 390 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 PABPC3Q9H361 631 aaKnown RBP16.54■□□□□ 0.24
LSM4-206ENST00000600289 ATP13A1Q9HD20 1204 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 TP53BP1Q12888 1972 aaPredicted RBP16.54■□□□□ 0.24
LSM4-206ENST00000600289 BPTFQ12830 3046 aa16.54■□□□□ 0.24
LSM4-206ENST00000600289 PLXNA2O75051 1894 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 NDUFS2O75306 463 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 TOP3BO95985 862 aaKnown RBP16.53■□□□□ 0.24
LSM4-206ENST00000600289 PTGER3P43115 390 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 HCAR3P49019 387 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 DHPSP49366 369 aaPredicted RBP16.53■□□□□ 0.24
LSM4-206ENST00000600289 SERPINH1P50454 418 aaKnown RBP16.53■□□□□ 0.24
LSM4-206ENST00000600289 GEMIN4P57678 1058 aaKnown RBP16.53■□□□□ 0.24
LSM4-206ENST00000600289 TPI1P60174 286 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 ARF5P84085 180 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 CREB5Q02930 508 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 DPYSL2Q16555 572 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 CA9Q16790 459 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 BOLA3Q53S33 107 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 LYSMD4Q5XG99 296 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 DSG4Q86SJ6 1040 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 ZNF564Q8TBZ8 553 aaPredicted RBP16.53■□□□□ 0.24
LSM4-206ENST00000600289 OR8D1Q8WZ84 308 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 TOE1Q96GM8 510 aaKnown RBP16.53■□□□□ 0.24
LSM4-206ENST00000600289 CCDC114Q96M63 670 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 NOL6Q9H6R4 1146 aaKnown RBP16.53■□□□□ 0.24
LSM4-206ENST00000600289 SGK2Q9HBY8 427 aa16.53■□□□□ 0.24
LSM4-206ENST00000600289 PCSK1NQ9UHG2 260 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms