RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 PRRX2Q99811 253 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 HERPUD2Q9BSE4 406 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 CALN1Q9BXU9 219 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 SLC6A17Q9H1V8 727 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 DDX56Q9NY93 547 aaKnown RBP14.04□□□□□ -0.16
VRK3-219ENST00000600137 SUN2Q9UH99 717 aa14.04□□□□□ -0.16
VRK3-219ENST00000600137 TARSL2A2RTX5 802 aaKnown RBP14.03□□□□□ -0.16
VRK3-219ENST00000600137 LRRD1A4D1F6 860 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 RNF103O00237 685 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 DDX3YO15523 660 aaKnown RBP14.03□□□□□ -0.16
VRK3-219ENST00000600137 KRT86O43790 486 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 PRAMEF11O60813 436 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 LILRB5O75023 590 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 SIN3BO75182 1162 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 APBB3O95704 486 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 NDUFV2P19404 249 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 FNTBP49356 437 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 SERPINH1P50454 418 aaKnown RBP14.03□□□□□ -0.16
VRK3-219ENST00000600137 NAP1L1P55209 391 aaKnown RBP14.03□□□□□ -0.16
VRK3-219ENST00000600137 LEKR1Q6ZMV7 388 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 WDR5BQ86VZ2 330 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 TSTD1Q8NFU3 115 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 HES6Q96HZ4 224 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 MRGPRX1Q96LB2 322 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 TSGA10Q9BZW7 698 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 LZTFL1Q9NQ48 299 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 DONSONQ9NYP3 566 aa14.03□□□□□ -0.16
VRK3-219ENST00000600137 PACSIN2Q9UNF0 486 aaPredicted RBP14.03□□□□□ -0.16
VRK3-219ENST00000600137 ABCA7Q8IZY2 2146 aa14.02□□□□□ -0.16
VRK3-219ENST00000600137 EDDM13A0A1B0GTR0 161 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 TCRBV21S2A2A0A5A6 115 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 HRO43593 1189 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 MFSD11O43934 449 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 MAFKO60675 156 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 FTCDO95954 541 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 KRT1P04264 644 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 ST8SIA6P61647 398 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 GBE1Q04446 702 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 CCDC173Q0VFZ6 552 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 CYTH1Q15438 398 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 IFI16Q16666 785 aaKnown RBP14.02□□□□□ -0.17
VRK3-219ENST00000600137 HEATR6Q6AI08 1181 aaKnown RBP14.02□□□□□ -0.17
VRK3-219ENST00000600137 ANO7Q6IWH7 933 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 RETSATQ6NUM9 610 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 TMCO3Q6UWJ1 677 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 SPOCD1Q6ZMY3 1216 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 METTL3Q86U44 580 aaKnown RBP14.02□□□□□ -0.17
VRK3-219ENST00000600137 TMPRSS6Q8IU80 811 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 RCOR2Q8IZ40 523 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 OR2A12Q8NGT7 310 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 OR2T3Q8NH03 318 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 EXD1Q8NHP7 514 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 FAM126AQ9BYI3 521 aaPredicted RBP14.02□□□□□ -0.17
VRK3-219ENST00000600137 RSPH9Q9H1X1 276 aaPredicted RBP14.02□□□□□ -0.17
VRK3-219ENST00000600137 POLMQ9NP87 494 aaPredicted RBP14.02□□□□□ -0.17
VRK3-219ENST00000600137 CD93Q9NPY3 652 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 ZSCAN32Q9NX65 697 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 SLC25A13Q9UJS0 675 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 AMFRQ9UKV5 643 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 PYCARDQ9ULZ3 195 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 PLXND1Q9Y4D7 1925 aa14.02□□□□□ -0.17
VRK3-219ENST00000600137 USP34Q70CQ2 3546 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 hCG_1818297A0A087WSY0 165 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 CCDC66A2RUB6 948 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 ARHGAP42A6NI28 874 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 AXIN1O15169 862 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 ZRANB2O95218 330 aaKnown RBP eCLIP14.01□□□□□ -0.17
VRK3-219ENST00000600137 PTMAP06454 111 aaKnown RBP14.01□□□□□ -0.17
VRK3-219ENST00000600137 PYGMP11217 842 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 KRT10P13645 584 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 CLCN6P51797 869 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 GALNT2Q10471 571 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 NUMA1Q14980 2115 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 LLGL1Q15334 1064 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 MAP7D1Q3KQU3 841 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 INO80DQ53TQ3 878 aaPredicted RBP14.01□□□□□ -0.17
VRK3-219ENST00000600137 DCAF12L1Q5VU92 463 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 AADACL2Q6P093 401 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 C22orf39Q6P5X5 142 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 Q6ZVU0 165 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 PEX26Q7Z412 305 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 LONP2Q86WA8 852 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 SYCE1Q8N0S2 351 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 STK40Q8N2I9 435 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 FRMD1Q8N878 549 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 ATP11CQ8NB49 1132 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 HMGB4Q8WW32 186 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 ISG20Q96AZ6 181 aaKnown RBP14.01□□□□□ -0.17
VRK3-219ENST00000600137 NSMCE3Q96MG7 304 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 DTLQ9NZJ0 730 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 IPO11Q9UI26 975 aaKnown RBP14.01□□□□□ -0.17
VRK3-219ENST00000600137 SARDHQ9UL12 918 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 FCF1Q9Y324 198 aaKnown RBP14.01□□□□□ -0.17
VRK3-219ENST00000600137 SHROOM3Q8TF72 1996 aa14.01□□□□□ -0.17
VRK3-219ENST00000600137 FRYLO94915 3013 aa14□□□□□ -0.17
VRK3-219ENST00000600137 ZSCAN5CA6NGD5 496 aaPredicted RBP14□□□□□ -0.17
VRK3-219ENST00000600137 DFFAO00273 331 aa14□□□□□ -0.17
VRK3-219ENST00000600137 MCF2LO15068 1137 aa14□□□□□ -0.17
VRK3-219ENST00000600137 NRDCO43847 1150 aa14□□□□□ -0.17
VRK3-219ENST00000600137 SYNCRIPO60506 623 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms