RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 DPP6P42658 865 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 TPI1P60174 286 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 ARF5P84085 180 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 SFSWAPQ12872 951 aaKnown RBP17.1■□□□□ 0.33
SSBP4-204ENST00000597724 NUMA1Q14980 2115 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 POLD3Q15054 466 aaPredicted RBP17.1■□□□□ 0.33
SSBP4-204ENST00000597724 H2AFVQ71UI9 128 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 TC2NQ8N9U0 490 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 CTNNBL1Q8WYA6 563 aaPredicted RBP17.1■□□□□ 0.33
SSBP4-204ENST00000597724 BTBD6Q96KE9 485 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 KCTD15Q96SI1 283 aaPredicted RBP17.1■□□□□ 0.33
SSBP4-204ENST00000597724 BTBD1Q9H0C5 482 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 FBXL12Q9NXK8 326 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 NCKAP1Q9Y2A7 1128 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 DCHS1Q96JQ0 3298 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 PRR5-ARHGAP8B1AHC4 643 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 MYO1FO00160 1098 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 EEF2KO00418 725 aaKnown RBP17.09■□□□□ 0.33
SSBP4-204ENST00000597724 ALOX15BO15296 676 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 CD160O95971 181 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 ADH1BP00325 375 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 IL1BP01584 269 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 TCF4P15884 667 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 C5AR1P21730 350 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 HOXD12P35452 270 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 PSMD8P48556 350 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 SERPINH1P50454 418 aaKnown RBP17.09■□□□□ 0.33
SSBP4-204ENST00000597724 YBEYP58557 167 aaPredicted RBP17.09■□□□□ 0.33
SSBP4-204ENST00000597724 ARHGAP8P85298 464 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 BOLA3Q53S33 107 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 SYCP2LQ5T4T6 812 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 PEAR1Q5VY43 1037 aaPredicted RBP17.09■□□□□ 0.33
SSBP4-204ENST00000597724 TCEAL6Q6IPX3 200 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 DSG4Q86SJ6 1040 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 UMODL1-AS1Q8N2C9 162 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 OR2A12Q8NGT7 310 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 ZNF564Q8TBZ8 553 aaPredicted RBP17.09■□□□□ 0.33
SSBP4-204ENST00000597724 TCEAL3Q969E4 200 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 PCED1AQ9H1Q7 454 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 SPTLC3Q9NUV7 552 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 CTTNBP2NLQ9P2B4 639 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 UVRAGQ9P2Y5 699 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 SERGEFQ9UGK8 458 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 PPM1HQ9ULR3 514 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 HPCAL4Q9UM19 191 aa17.09■□□□□ 0.33
SSBP4-204ENST00000597724 METTL12A8MUP2 240 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 PATE3B3GLJ2 98 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 KDELR3O43731 214 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 GDF9O60383 454 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 ZNF821O75541 412 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-204ENST00000597724 RNASEH2AO75792 299 aaKnown RBP17.08■□□□□ 0.32
SSBP4-204ENST00000597724 TMEM253P0C7T8 217 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 GOT1P17174 413 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 HCAR3P49019 387 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 ZNF135P52742 658 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-204ENST00000597724 PPP6R3Q5H9R7 873 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-204ENST00000597724 KCNT1Q5JUK3 1230 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 WDR45BQ5MNZ6 344 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 C22orf39Q6P5X5 142 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 AADATQ8N5Z0 425 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 C12orf50Q8NA57 414 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-204ENST00000597724 GANCQ8TET4 914 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 DNASE2BQ8WZ79 361 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 CCDC114Q96M63 670 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 OMDQ99983 421 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 CEP44Q9C0F1 390 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 NEUROG2Q9H2A3 272 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 TNKS2Q9H2K2 1166 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 SGK2Q9HBY8 427 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 RXFP3Q9NSD7 469 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 DONSONQ9NYP3 566 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 EVLQ9UI08 416 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-204ENST00000597724 SARDHQ9UL12 918 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 FZD4Q9ULV1 537 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 FARP1Q9Y4F1 1045 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-204ENST00000597724 ACTL7AQ9Y615 435 aa17.08■□□□□ 0.32
SSBP4-204ENST00000597724 ATXN2Q99700 1313 aaKnown RBP17.07■□□□□ 0.32
SSBP4-204ENST00000597724 A0A1W2PP55 124 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 RASA4BC9J798 803 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 KHNYNO15037 678 aaKnown RBP17.07■□□□□ 0.32
SSBP4-204ENST00000597724 DAPK3O43293 454 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 RASA4O43374 803 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 BNIP3LO60238 219 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 SEMA4FO95754 770 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 PI4KAP42356 2102 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 GEMIN4P57678 1058 aaKnown RBP17.07■□□□□ 0.32
SSBP4-204ENST00000597724 DPYSL2Q16555 572 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 PARP15Q460N3 678 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 AASDHQ4L235 1098 aaPredicted RBP17.07■□□□□ 0.32
SSBP4-204ENST00000597724 FAM46CQ5VWP2 391 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 TXNRD3NBQ6F5E7 133 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 RFX8Q6ZV50 586 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 RGL4Q8IZJ4 473 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 HDDC3Q8N4P3 179 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 TEKT4Q8WW24 435 aa17.07■□□□□ 0.32
SSBP4-204ENST00000597724 ISG20Q96AZ6 181 aaKnown RBP17.07■□□□□ 0.32
SSBP4-204ENST00000597724 C6orf106Q9H6K1 298 aaPredicted RBP17.07■□□□□ 0.32
SSBP4-204ENST00000597724 CWC15Q9P013 229 aaKnown RBP17.07■□□□□ 0.32
SSBP4-204ENST00000597724 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.06■□□□□ 0.32
SSBP4-204ENST00000597724 ZSCAN5CA6NGD5 496 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms