RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 HEMGNQ9BXL5 484 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 MUC3BQ9H195 1237 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 ATP13A1Q9HD20 1204 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 PRSS16Q9NQE7 514 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 PRMT8Q9NR22 394 aaPredicted RBP10.8□□□□□ -0.68
LIG1-210ENST00000596332 VPS28Q9UK41 221 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 EFR3BQ9Y2G0 817 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 RAD54BQ9Y620 910 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 WDFY4Q6ZS81 3184 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 NUP205Q92621 2012 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 MYO18AQ92614 2054 aaKnown RBP10.8□□□□□ -0.68
LIG1-210ENST00000596332 CACNA1IQ9P0X4 2223 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 C10orf142B7Z368 130 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 CBX4O00257 560 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 ENC1O14682 589 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 MUSKO15146 869 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 DAPK3O43293 454 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 CST8O60676 142 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 HOXA6P31267 233 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 MAGEA9P43362 315 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 RGRP47804 291 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 SERPINH1P50454 418 aaKnown RBP10.79□□□□□ -0.68
LIG1-210ENST00000596332 COPS2P61201 443 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 SULT2A1Q06520 285 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 DLG2Q15700 870 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 HSF5Q4G112 596 aaPredicted RBP10.79□□□□□ -0.68
LIG1-210ENST00000596332 TSSK4Q6SA08 328 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 BBS12Q6ZW61 710 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 B4GALNT4Q76KP1 1039 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 RASSF3Q86WH2 238 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 C1orf210Q8IVY1 113 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 PGBD5Q8N414 524 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 OR2A12Q8NGT7 310 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 UBE2Q2Q8WVN8 375 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 MAML1Q92585 1016 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 EXOC4Q96A65 974 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 ERLEC1Q96DZ1 483 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 MKRN2Q9H000 416 aaKnown RBP10.79□□□□□ -0.68
LIG1-210ENST00000596332 SLC6A17Q9H1V8 727 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 LHX3Q9UBR4 397 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 EBF1Q9UH73 591 aa10.79□□□□□ -0.68
LIG1-210ENST00000596332 IPO11Q9UI26 975 aaKnown RBP10.79□□□□□ -0.68
LIG1-210ENST00000596332 NPC1O15118 1278 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 NRDCO43847 1150 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 SIN3BO75182 1162 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 GJB3O75712 270 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 ATP1A1P05023 1023 aaKnown RBP10.78□□□□□ -0.68
LIG1-210ENST00000596332 ATP5BP06576 529 aaKnown RBP10.78□□□□□ -0.68
LIG1-210ENST00000596332 CTSLP07711 333 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 GABRG2P18507 467 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 GARSP41250 739 aaKnown RBP10.78□□□□□ -0.68
LIG1-210ENST00000596332 CXCL12P48061 93 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 IL10RBQ08334 325 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 SLC20A2Q08357 652 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 SLC10A7Q0GE19 358 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 HS1BP3Q53T59 392 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 INO80DQ53TQ3 878 aaPredicted RBP10.78□□□□□ -0.68
LIG1-210ENST00000596332 ZNF569Q5MCW4 686 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 KAZNQ674X7 775 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 IL31Q6EBC2 164 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 CHPFQ8IZ52 775 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 TEX26Q8N6G2 289 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 CNTD1Q8N815 330 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 RBM41Q96IZ5 413 aaKnown RBP10.78□□□□□ -0.68
LIG1-210ENST00000596332 LGMNQ99538 433 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 IER2Q9BTL4 223 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 C2orf49Q9BVC5 232 aaPredicted RBP10.78□□□□□ -0.68
LIG1-210ENST00000596332 OSBPL8Q9BZF1 889 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 PRDM16Q9HAZ2 1276 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 CD93Q9NPY3 652 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 SARDHQ9UL12 918 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 PLA2G4CQ9UP65 541 aa10.78□□□□□ -0.68
LIG1-210ENST00000596332 R3HDM2Q9Y2K5 976 aaKnown RBP10.78□□□□□ -0.68
LIG1-210ENST00000596332 FCF1Q9Y324 198 aaKnown RBP10.78□□□□□ -0.68
LIG1-210ENST00000596332 CKAP5Q14008 2032 aa10.77□□□□□ -0.68
LIG1-210ENST00000596332 TARSL2A2RTX5 802 aaKnown RBP10.77□□□□□ -0.69
LIG1-210ENST00000596332 ARHGAP42A6NI28 874 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 DFFAO00273 331 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 GALR2O43603 387 aaPredicted RBP10.77□□□□□ -0.69
LIG1-210ENST00000596332 HOXB2P14652 356 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 CR2P20023 1033 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 PXNP49023 591 aaPredicted RBP10.77□□□□□ -0.69
LIG1-210ENST00000596332 METAP1P53582 386 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 DYNLT1P63172 113 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 TCF15Q12870 199 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 RPS6KA1Q15418 735 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 NUDT18Q6ZVK8 323 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 RFX6Q8HWS3 928 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 PLPP6Q8IY26 295 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 RASGEF1CQ8N431 466 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 FRMD1Q8N878 549 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 CHST14Q8NCH0 376 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 PRSS33Q8NF86 280 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 UCMAQ8WVF2 138 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 FATE1Q969F0 183 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 ISG20Q96AZ6 181 aaKnown RBP10.77□□□□□ -0.69
LIG1-210ENST00000596332 MRGPRX1Q96LB2 322 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 CARD9Q9H257 536 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 TNKS2Q9H2K2 1166 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 C10orf88Q9H8K7 445 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms