RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 KIAA1324Q6UXG2 1013 aaKnown RBP14.66□□□□□ -0.06
LIG1-208ENST00000595758 ARHGAP12Q8IWW6 846 aa14.66□□□□□ -0.06
LIG1-208ENST00000595758 RNF10Q8N5U6 811 aaKnown RBP14.66□□□□□ -0.06
LIG1-208ENST00000595758 LRRC57Q8N9N7 239 aa14.66□□□□□ -0.06
LIG1-208ENST00000595758 PCDH19Q8TAB3 1148 aa14.66□□□□□ -0.06
LIG1-208ENST00000595758 SIPA1Q96FS4 1042 aa14.66□□□□□ -0.06
LIG1-208ENST00000595758 MKRN2Q9H000 416 aaKnown RBP14.66□□□□□ -0.06
LIG1-208ENST00000595758 SLC6A17Q9H1V8 727 aa14.66□□□□□ -0.06
LIG1-208ENST00000595758 FAM86C1Q9NVL1 165 aa14.66□□□□□ -0.06
LIG1-208ENST00000595758 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.66□□□□□ -0.06
LIG1-208ENST00000595758 MFHAS1Q9Y4C4 1052 aa14.66□□□□□ -0.06
LIG1-208ENST00000595758 MUC22E2RYF6 1773 aaPredicted RBP14.65□□□□□ -0.06
LIG1-208ENST00000595758 GRID2IPA4D2P6 1211 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 DFFAO00273 331 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 HRO43593 1189 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 KRT86O43790 486 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 RNASEH1O60930 286 aaKnown RBP14.65□□□□□ -0.06
LIG1-208ENST00000595758 LILRB5O75023 590 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 VAV1P15498 845 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 CNR2P34972 360 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 SERPINB6P35237 376 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 COPAP53621 1224 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 LEKR1Q6ZMV7 388 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 VSIG1Q86XK7 387 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 NETO2Q8NC67 525 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 PRCCQ92733 491 aaPredicted RBP14.65□□□□□ -0.06
LIG1-208ENST00000595758 PTPRN2Q92932 1015 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 RNF25Q96BH1 459 aaPredicted RBP14.65□□□□□ -0.06
LIG1-208ENST00000595758 FAF2Q96CS3 445 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 RNF157Q96PX1 679 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 MAK16Q9BXY0 300 aaKnown RBP14.65□□□□□ -0.06
LIG1-208ENST00000595758 CEP44Q9C0F1 390 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 RSPH9Q9H1X1 276 aaPredicted RBP14.65□□□□□ -0.06
LIG1-208ENST00000595758 GUCA1BQ9UMX6 200 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 ACTL7AQ9Y615 435 aa14.65□□□□□ -0.06
LIG1-208ENST00000595758 C3orf70A6NLC5 250 aaPredicted RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 ZNF487B1APH4 448 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 BNIP3LO60238 219 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 PRAMEF11O60813 436 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 PALMO75781 387 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 RPP40O75818 363 aaKnown RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 CD160O95971 181 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 NBL1P41271 181 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 RPS14P62263 151 aaKnown RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 NHLH1Q02575 133 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 SRSF5Q13243 272 aaKnown RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 BYSLQ13895 437 aaKnown RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 ELAVL3Q14576 367 aaKnown RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 ZNF776Q68DI1 518 aaPredicted RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 C22orf39Q6P5X5 142 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 Q6ZVU0 165 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 METTL3Q86U44 580 aaKnown RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 TP53INP2Q8IXH6 220 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 KATNAL2Q8IYT4 538 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 RCOR2Q8IZ40 523 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 SYCE1Q8N0S2 351 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 STK40Q8N2I9 435 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 PQLC3Q8N755 202 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 GAB3Q8WWW8 586 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 CASKIN2Q8WXE0 1202 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 RLN3Q8WXF3 142 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 KRT35Q92764 455 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 ZNF830Q96NB3 372 aaPredicted RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 FAM129BQ96TA1 746 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 TNKS2Q9H2K2 1166 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 IPO11Q9UI26 975 aaKnown RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 AMFRQ9UKV5 643 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 INVSQ9Y283 1065 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 FCF1Q9Y324 198 aaKnown RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 FARP1Q9Y4F1 1045 aaPredicted RBP14.64□□□□□ -0.07
LIG1-208ENST00000595758 CKAP5Q14008 2032 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 NUP205Q92621 2012 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 WDFY4Q6ZS81 3184 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 CHD5Q8TDI0 1954 aa14.64□□□□□ -0.07
LIG1-208ENST00000595758 J3KR12 359 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 ZNF217O75362 1048 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 ZRANB2O95218 330 aaKnown RBP eCLIP14.63□□□□□ -0.07
LIG1-208ENST00000595758 ACADMP11310 421 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 P2RY2P41231 377 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 RECQLP46063 649 aaPredicted RBP14.63□□□□□ -0.07
LIG1-208ENST00000595758 MARCKSL1P49006 195 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 DNA2P51530 1060 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 ZBTB16Q05516 673 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 PAFAH1B3Q15102 231 aaKnown RBP14.63□□□□□ -0.07
LIG1-208ENST00000595758 MAP7D1Q3KQU3 841 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 INO80DQ53TQ3 878 aaPredicted RBP14.63□□□□□ -0.07
LIG1-208ENST00000595758 NCBP2-AS2Q69YL0 99 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 MFSD7Q6UXD7 560 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 ZNF662Q6ZS27 426 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 CEP68Q76N32 757 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 PEX26Q7Z412 305 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 DSG4Q86SJ6 1040 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 NT5DC3Q86UY8 548 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 CACUL1Q86Y37 369 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 MMAAQ8IVH4 418 aaKnown RBP14.63□□□□□ -0.07
LIG1-208ENST00000595758 PCDH20Q8N6Y1 951 aaKnown RBP14.63□□□□□ -0.07
LIG1-208ENST00000595758 EXD1Q8NHP7 514 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.63□□□□□ -0.07
LIG1-208ENST00000595758 OR8D1Q8WZ84 308 aa14.63□□□□□ -0.07
LIG1-208ENST00000595758 ISG20Q96AZ6 181 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms