RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TTC7AQ9ULT0 858 aaPredicted RBP13.26□□□□□ -0.29
SCAF1-202ENST00000595242 SPTAN1Q13813 2472 aaKnown RBP13.25□□□□□ -0.29
SCAF1-202ENST00000595242 KIF26BQ2KJY2 2108 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 NBPF19A0A087WUL8 3843 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 FAM92AA1XBS5 289 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 KLK10O43240 276 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 ERLIN1O75477 346 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
SCAF1-202ENST00000595242 SLC5A3P53794 718 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 RACK1P63244 317 aaKnown RBP13.25□□□□□ -0.29
SCAF1-202ENST00000595242 CENPCQ03188 943 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 C2orf54Q08AI8 447 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 E2F5Q15329 346 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 SGSM1Q2NKQ1 1148 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 GLE1Q53GS7 698 aaKnown RBP13.25□□□□□ -0.29
SCAF1-202ENST00000595242 SPOPLQ6IQ16 392 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 SERPINA13PQ6UXR4 307 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 DAAM2Q86T65 1068 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 OR2T3Q8NH03 318 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 KCNE4Q8WWG9 221 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 SORCS1Q8WY21 1168 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 TRIM11Q96F44 468 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 FAM117AQ9C073 453 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 NIF3L1Q9GZT8 377 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 ARFGAP3Q9NP61 516 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 ELOVL2Q9NXB9 296 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 AMFRQ9UKV5 643 aa13.25□□□□□ -0.29
SCAF1-202ENST00000595242 MYO9AB2RTY4 2548 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 TEP1Q99973 2627 aaKnown RBP13.24□□□□□ -0.29
SCAF1-202ENST00000595242 TMCO5BA8MYB1 307 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 MIF4GDA9UHW6 222 aaKnown RBP13.24□□□□□ -0.29
SCAF1-202ENST00000595242 DDX3YO15523 660 aaKnown RBP13.24□□□□□ -0.29
SCAF1-202ENST00000595242 PHACTR2O75167 634 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 TNNC2P02585 160 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 RHOXF2BP0C7M4 288 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 MYBL1P10243 752 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 KRT5P13647 590 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 CKMT2P17540 419 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 TNFRSF8P28908 595 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 CXCR5P32302 372 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 ATP5C1P36542 298 aaKnown RBP13.24□□□□□ -0.29
SCAF1-202ENST00000595242 VSNL1P62760 191 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 TAF3Q5VWG9 929 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 CCDC70Q6NSX1 233 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 ANKS1BQ7Z6G8 1248 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 RBBP8NLQ8NC74 664 aaPredicted RBP13.24□□□□□ -0.29
SCAF1-202ENST00000595242 B3GALNT2Q8NCR0 500 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 SKA1Q96BD8 255 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 PIWIL1Q96J94 861 aaKnown RBP13.24□□□□□ -0.29
SCAF1-202ENST00000595242 RHOXF2Q9BQY4 288 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 SELENOOQ9BVL4 669 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 CIPCQ9C0C6 399 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 XYLT2Q9H1B5 865 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 VRTNQ9H8Y1 702 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 ACP6Q9NPH0 428 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 TLR8Q9NR97 1041 aaKnown RBP13.24□□□□□ -0.29
SCAF1-202ENST00000595242 COMMD8Q9NX08 183 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 OGFRQ9NZT2 677 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 PACSIN2Q9UNF0 486 aaPredicted RBP13.24□□□□□ -0.29
SCAF1-202ENST00000595242 PCDHB1Q9Y5F3 818 aa13.24□□□□□ -0.29
SCAF1-202ENST00000595242 HEMK1Q9Y5R4 338 aaPredicted RBP13.24□□□□□ -0.29
SCAF1-202ENST00000595242 A8MXQ7 604 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 STAU1O95793 577 aaKnown RBP13.23□□□□□ -0.29
SCAF1-202ENST00000595242 CST3P01034 146 aaPredicted RBP13.23□□□□□ -0.29
SCAF1-202ENST00000595242 PENKP01210 267 aaPredicted RBP13.23□□□□□ -0.29
SCAF1-202ENST00000595242 MPOP05164 745 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 IGHV4-34P06331 123 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 ARRB1P49407 418 aaPredicted RBP13.23□□□□□ -0.29
SCAF1-202ENST00000595242 MYL6P60660 151 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 YWHAEP62258 255 aaKnown RBP13.23□□□□□ -0.29
SCAF1-202ENST00000595242 NFATC3Q12968 1075 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 CAMK2GQ13555 558 aaPredicted RBP13.23□□□□□ -0.29
SCAF1-202ENST00000595242 BEND6Q5SZJ8 279 aaPredicted RBP13.23□□□□□ -0.29
SCAF1-202ENST00000595242 FYB2Q5VWT5 728 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 KIAA1614Q5VZ46 1190 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 Q6ZNB5 142 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 LSMEM2Q8N112 164 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 VCPIP1Q96JH7 1222 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 SLC6A18Q96N87 628 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 PSMB7Q99436 277 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 DPH1Q9BZG8 443 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 CARD9Q9H257 536 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 SGK2Q9HBY8 427 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 CTTNBP2NLQ9P2B4 639 aa13.23□□□□□ -0.29
SCAF1-202ENST00000595242 A0A1W2PPC4 97 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 CCDC188H7C350 402 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 PGRMC1O00264 195 aaKnown RBP13.22□□□□□ -0.29
SCAF1-202ENST00000595242 YKT6O15498 198 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 MT-CO3P00414 261 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 DNTTP04053 509 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 WNT1P04628 370 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 FAM163BP0C2L3 166 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 C7P10643 843 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 CTNNA2P26232 953 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 EPHA8P29322 1005 aaPredicted RBP13.22□□□□□ -0.29
SCAF1-202ENST00000595242 ATICP31939 592 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 ASPAP45381 313 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 ERVPABLB-1P60509 514 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 NOMO3P69849 1222 aa13.22□□□□□ -0.29
SCAF1-202ENST00000595242 E2F1Q01094 437 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms