RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 PIP4K2CQ8TBX8 421 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 TTYH3Q9C0H2 523 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 GAREM1Q9H706 876 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 TAS2R14Q9NYV8 317 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 SLCO1B1Q9Y6L6 691 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 NUMA1Q14980 2115 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 TBC1D3DA0A087WVF3 549 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 TBC1D3IA0A087WXS9 549 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 TBC1D3EA0A087X179 549 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 TBC1D3KA0A087X1G2 549 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 A0A1W2PPC4 97 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 TBC1D3FA6NER0 549 aaPredicted RBP15.61■□□□□ 0.09
TRIM28-203ENST00000593582 TBC1D3LB9A6J9 549 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 FAM72CH0Y354 149 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 SLC7A4O43246 635 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 CCP110O43303 1012 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 SMAD6O43541 496 aaKnown RBP15.61■□□□□ 0.09
TRIM28-203ENST00000593582 GJB3O75712 270 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 TBC1D3HP0C7X1 549 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 GZMAP12544 262 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 CD59P13987 128 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 GLDCP23378 1020 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 PRKCIP41743 596 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 CCR5P51681 352 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 METAP1P53582 386 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 AIF1P55008 147 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 UBASH3AP57075 661 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 RACK1P63244 317 aaKnown RBP15.61■□□□□ 0.09
TRIM28-203ENST00000593582 FANCCQ00597 558 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 KLHL30Q0D2K2 578 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 CCDC15Q0P6D6 951 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 MAMLD1Q13495 774 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 HLA-BQ31612 363 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 POM121L1PQ3SYA9 428 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 FIGNQ5HY92 759 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 FAM72AQ5TYM5 149 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 TBC1D3GQ6DHY5 549 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 TBC1D3CQ6IPX1 549 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 FAM72DQ6L9T8 149 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 C22orf39Q6P5X5 142 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 ZNF571Q7Z3V5 609 aaPredicted RBP15.61■□□□□ 0.09
TRIM28-203ENST00000593582 NLRP14Q86W24 1093 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 FAM72BQ86X60 149 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 TBC1D3Q8IZP1 549 aaPredicted RBP15.61■□□□□ 0.09
TRIM28-203ENST00000593582 OR2A12Q8NGT7 310 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 ORAI3Q9BRQ5 295 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 CEP44Q9C0F1 390 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 KDM4CQ9H3R0 1056 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 TMEM248Q9NWD8 314 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 DNAI1Q9UI46 699 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 HPCAL4Q9UM19 191 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 ANKRD6Q9Y2G4 727 aa15.61■□□□□ 0.09
TRIM28-203ENST00000593582 CXorf51AA0A1B0GTR3 108 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 RAMP2O60895 175 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 ZMPSTE24O75844 475 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 FTLP02792 175 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-203ENST00000593582 PRNPP04156 253 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 ZNF883P0CG24 379 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 PMLP29590 882 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 L1CAMP32004 1257 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 CHRNA3P32297 505 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 SERPINH1P50454 418 aaKnown RBP15.6■□□□□ 0.09
TRIM28-203ENST00000593582 GEMIN4P57678 1058 aaKnown RBP15.6■□□□□ 0.09
TRIM28-203ENST00000593582 BNC1Q01954 994 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 CNTN1Q12860 1018 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 HNRNPDQ14103 355 aaKnown RBP15.6■□□□□ 0.09
TRIM28-203ENST00000593582 KIF19Q2TAC6 998 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 SKOR2Q2VWA4 1001 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-203ENST00000593582 ZSCAN23Q3MJ62 389 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 E4F1Q66K89 784 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-203ENST00000593582 TMC6Q7Z403 805 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 TMIEQ8NEW7 156 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 FAM131CQ96AQ9 280 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 SKA1Q96BD8 255 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 EPAS1Q99814 870 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 ACE2Q9BYF1 805 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-203ENST00000593582 MAGEB5Q9BZ81 275 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 MAGEH1Q9H213 219 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 TNKS2Q9H2K2 1166 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 DYRK4Q9NR20 520 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 NDFIP2Q9NV92 336 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 ANGPTL2Q9UKU9 493 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 ADAMTS9Q9P2N4 1935 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 CACNA1EQ15878 2313 aa15.6■□□□□ 0.09
TRIM28-203ENST00000593582 ASCC3Q8N3C0 2202 aaKnown RBP15.59■□□□□ 0.09
TRIM28-203ENST00000593582 PLK4O00444 970 aa15.59■□□□□ 0.09
TRIM28-203ENST00000593582 KPNA3O00505 521 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-203ENST00000593582 PLRG1O43660 514 aaKnown RBP15.59■□□□□ 0.09
TRIM28-203ENST00000593582 RTN2O75298 545 aa15.59■□□□□ 0.09
TRIM28-203ENST00000593582 SKILP12757 684 aa15.59■□□□□ 0.09
TRIM28-203ENST00000593582 PSMA2P25787 234 aa15.59■□□□□ 0.09
TRIM28-203ENST00000593582 EPHB2P29323 1055 aa15.59■□□□□ 0.09
TRIM28-203ENST00000593582 ACVRL1P37023 503 aa15.59■□□□□ 0.09
TRIM28-203ENST00000593582 C21orf59P57076 290 aa15.59■□□□□ 0.09
TRIM28-203ENST00000593582 ARF5P84085 180 aa15.59■□□□□ 0.09
TRIM28-203ENST00000593582 POLD3Q15054 466 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-203ENST00000593582 AGBL4Q5VU57 503 aa15.59■□□□□ 0.09
TRIM28-203ENST00000593582 PLEKHA7Q6IQ23 1121 aa15.59■□□□□ 0.09
TRIM28-203ENST00000593582 PYROXD2Q8N2H3 581 aa15.59■□□□□ 0.09
TRIM28-203ENST00000593582 PCDH20Q8N6Y1 951 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms