RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 RAD51BO15315 384 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 SLC7A4O43246 635 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 SART1O43290 800 aaKnown RBP11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 OPA1O60313 960 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 USP12O75317 370 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 CSO75390 466 aaKnown RBP11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 SLC9A1P19634 815 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 CHRNA3P32297 505 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 ACTN2P35609 894 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 CDK17Q00537 523 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 SULT2A1Q06520 285 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 ZNF177Q13360 481 aaPredicted RBP11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 ZNF211Q13398 564 aaPredicted RBP11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 ILKQ13418 452 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 LY6DQ14210 128 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 RABGAP1LQ5R372 815 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 FAM46CQ5VWP2 391 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 ZNF605Q86T29 641 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 TRIM59Q8IWR1 403 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 OR2A12Q8NGT7 310 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 OR4C6Q8NH72 309 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 DHTKD1Q96HY7 919 aaPredicted RBP11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 SLC2A13Q96QE2 648 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 MUC3BQ9H195 1237 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 THAP9Q9H5L6 903 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 DNAJC28Q9NX36 388 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 MPP6Q9NZW5 540 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 VPS51Q9UID3 782 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 DMTF1Q9Y222 760 aa11.49□□□□□ -0.57
PRKCSH-220ENST00000593104 TRPM6Q9BX84 2022 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 PMM2O15305 246 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 PCDH8O95206 1070 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 SMC2O95347 1197 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 ADCY5O95622 1261 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 CDK4P11802 303 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 TGM2P21980 687 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 CCR1P32246 355 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 CFHR1Q03591 330 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 SLC12A1Q13621 1099 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 CDKN3Q16667 212 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 PTPN20Q4JDL3 420 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 TAF1BQ53T94 588 aaPredicted RBP11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 ARSIQ5FYB1 569 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 C3orf38Q5JPI3 329 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 CDCP2Q5VXM1 449 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 Q6ZSR6 202 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 BEND5Q7L4P6 421 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 PTAR1Q7Z6K3 402 aaPredicted RBP11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 TFAP2DQ7Z6R9 452 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 DSG4Q86SJ6 1040 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 IQCHQ86VS3 1027 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 HORMAD1Q86X24 394 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 CREBRFQ8IUR6 639 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 ATP11CQ8NB49 1132 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 OR7D4Q8NG98 312 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 SRRTQ9BXP5 876 aaKnown RBP11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 KDM4CQ9H3R0 1056 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 PREBQ9HCU5 417 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 PIGVQ9NUD9 493 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 SLC12A6Q9UHW9 1150 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 KLF15Q9UIH9 416 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 GGT7Q9UJ14 662 aa11.48□□□□□ -0.57
PRKCSH-220ENST00000593104 TEX51A0A1B0GUA7 166 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 POM121BA6NF01 834 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 K7ESM1 405 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 M0QYT0 321 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 TK2O00142 265 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 P4HA2O15460 535 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 KLK10O43240 276 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 AFPP02771 609 aaKnown RBP11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 RHOCP08134 193 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 CKMT1AP12532 417 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 GKP32189 559 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 RNASE9P60153 205 aaKnown RBP11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 CETN1Q12798 172 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 TCEA2Q15560 299 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 RAB6CQ53S08 254 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 C2CD6Q53TS8 623 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 ARTNQ5T4W7 220 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 KIAA1614Q5VZ46 1190 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 C22orf39Q6P5X5 142 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 OLFML1Q6UWY5 402 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 DPY19L3Q6ZPD9 716 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 ZNF683Q8IZ20 524 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 STK32AQ8WU08 396 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 COL26A1Q96A83 441 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 CCDC34Q96HJ3 373 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 HIC2Q96JB3 615 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 PPP1R13BQ96KQ4 1090 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 BMFQ96LC9 184 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 MED15Q96RN5 788 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 TKTL2Q9H0I9 626 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 RAB6CQ9H0N0 254 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 TCEAL2Q9H3H9 227 aaPredicted RBP11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 KLHL11Q9NVR0 708 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 SATB2Q9UPW6 733 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 ITM2BQ9Y287 266 aa11.47□□□□□ -0.57
PRKCSH-220ENST00000593104 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms