RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 DFFAO00273 331 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 DDX3YO15523 660 aaKnown RBP10.15□□□□□ -0.78
TPM4-216ENST00000592822 MFSD11O43934 449 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 PRAMEF11O60813 436 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 SIN3BO75182 1162 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 ZRANB2O95218 330 aaKnown RBP eCLIP10.15□□□□□ -0.78
TPM4-216ENST00000592822 GABRG2P18507 467 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 NNMTP40261 264 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 FNTBP49356 437 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 SERPINH1P50454 418 aaKnown RBP10.15□□□□□ -0.78
TPM4-216ENST00000592822 COPAP53621 1224 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 SLC20A2Q08357 652 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 TCF15Q12870 199 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 STARD3Q14849 445 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 DLG2Q15700 870 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 ZNF528Q3MIS6 628 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 ACCSLQ4AC99 568 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 C9orf64Q5T6V5 341 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 HEATR6Q6AI08 1181 aaKnown RBP10.15□□□□□ -0.78
TPM4-216ENST00000592822 ANO7Q6IWH7 933 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 ARHGAP36Q6ZRI8 547 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 RASSF3Q86WH2 238 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 ZNF354CQ86Y25 554 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 RCOR2Q8IZ40 523 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 MDGA1Q8NFP4 955 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 EXD1Q8NHP7 514 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 ALG3Q92685 438 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 PTPRN2Q92932 1015 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 PRRX2Q99811 253 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 MKRN2Q9H000 416 aaKnown RBP10.15□□□□□ -0.78
TPM4-216ENST00000592822 SLC6A17Q9H1V8 727 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 PDFQ9HBH1 243 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 POLMQ9NP87 494 aaPredicted RBP10.15□□□□□ -0.78
TPM4-216ENST00000592822 EBF1Q9UH73 591 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 SUN2Q9UH99 717 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 AMFRQ9UKV5 643 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 PYCARDQ9ULZ3 195 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 PACSIN2Q9UNF0 486 aaPredicted RBP10.15□□□□□ -0.78
TPM4-216ENST00000592822 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.15□□□□□ -0.78
TPM4-216ENST00000592822 SHROOM3Q8TF72 1996 aa10.15□□□□□ -0.78
TPM4-216ENST00000592822 VPS13AQ96RL7 3174 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 FANCMQ8IYD8 2048 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 EDDM13A0A1B0GTR0 161 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 TARSL2A2RTX5 802 aaKnown RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 ZSCAN5CA6NGD5 496 aaPredicted RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 MIF4GDA9UHW6 222 aaKnown RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 SYNCRIPO60506 623 aaKnown RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 ZNF821O75541 412 aaPredicted RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 ALDH1A2O94788 518 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 C7P10643 843 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 KRT10P13645 584 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 NDUFV2P19404 249 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 SERPINB6P35237 376 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 CLCN6P51797 869 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 RWDD2BP57060 319 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 GEMIN4P57678 1058 aaKnown RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 GBE1Q04446 702 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 ADCY2Q08462 1091 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 SLC10A2Q12908 348 aaPredicted RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 LLGL1Q15334 1064 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 ODF2Q5BJF6 829 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 SLC9A4Q6AI14 798 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 C22orf39Q6P5X5 142 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 Q6ZVU0 165 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 RFX6Q8HWS3 928 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 STK40Q8N2I9 435 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 PLD5Q8N7P1 536 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 HMGB4Q8WW32 186 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 HES6Q96HZ4 224 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 RBM41Q96IZ5 413 aaKnown RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 MRGPRX1Q96LB2 322 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 FAM129BQ96TA1 746 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 MAK16Q9BXY0 300 aaKnown RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 KCNH6Q9H252 994 aa10.14□□□□□ -0.79
TPM4-216ENST00000592822 TRMT1Q9NXH9 659 aaKnown RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 IPO11Q9UI26 975 aaKnown RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 FCF1Q9Y324 198 aaKnown RBP10.14□□□□□ -0.79
TPM4-216ENST00000592822 hCG_1818297A0A087WSY0 165 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 CCDC163A0A0D9SF12 145 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 USP27XA6NNY8 438 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 APOL1O14791 398 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 AXIN1O15169 862 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 ZSCAN12O43309 604 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 MAFKO60675 156 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 TMCC1O94876 653 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 MAP3K6O95382 1288 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 PEX11BO96011 259 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 PYGMP11217 842 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 COPS2P61201 443 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 RPS14P62263 151 aaKnown RBP10.13□□□□□ -0.79
TPM4-216ENST00000592822 IL10RBQ08334 325 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 GALNT2Q10471 571 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 CYTH1Q15438 398 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 PPP2R5EQ16537 467 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 INO80DQ53TQ3 878 aaPredicted RBP10.13□□□□□ -0.79
TPM4-216ENST00000592822 TFDP3Q5H9I0 405 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 MEI1Q5TIA1 1274 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 DCAF12L1Q5VU92 463 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 AADACL2Q6P093 401 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 NPNTQ6UXI9 565 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms