RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 B4GALNT4Q76KP1 1039 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 GALNT7Q86SF2 657 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.84□□□□□ -1.31
VMP1-215ENST00000592619 EXD3Q8N9H8 876 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 NCSTNQ92542 709 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 ATP2A3Q93084 1043 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 RSRC1Q96IZ7 334 aaKnown RBP6.84□□□□□ -1.31
VMP1-215ENST00000592619 HIC2Q96JB3 615 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 BBC3Q96PG8 261 aaPredicted RBP6.84□□□□□ -1.31
VMP1-215ENST00000592619 CLSTN3Q9BQT9 956 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 KRTAP9-3Q9BYQ3 159 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 TRIM31Q9BZY9 425 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 RRP7BPQ9NSQ0 103 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 ABCC3O15438 1527 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 LMTK2Q8IWU2 1503 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 NPATQ14207 1427 aa6.84□□□□□ -1.32
VMP1-215ENST00000592619 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.83□□□□□ -1.32
VMP1-215ENST00000592619 CCNT1O60563 726 aaKnown RBP6.83□□□□□ -1.32
VMP1-215ENST00000592619 MTA2O94776 668 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 CNTN5O94779 1100 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 CLEC3BP05452 202 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 HSPA1AP0DMV8 641 aaKnown RBP6.83□□□□□ -1.32
VMP1-215ENST00000592619 HSPA1BP0DMV9 641 aaKnown RBP6.83□□□□□ -1.32
VMP1-215ENST00000592619 UBL4AP11441 157 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 PKMP14618 531 aaKnown RBP6.83□□□□□ -1.32
VMP1-215ENST00000592619 MAKP20794 623 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 RPS6KB1P23443 525 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 CLK1P49759 484 aaKnown RBP6.83□□□□□ -1.32
VMP1-215ENST00000592619 OAZ1P54368 228 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 ADPRHP54922 357 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 CYP4F2P78329 520 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 SHC2P98077 582 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 B4GALNT1Q00973 533 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 DMWDQ09019 674 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 FOXI1Q12951 378 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 EIF4A2Q14240 407 aaKnown RBP6.83□□□□□ -1.32
VMP1-215ENST00000592619 NAA25Q14CX7 972 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 SPATS1Q496A3 300 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 GXYLT1Q4G148 440 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 FAM133BQ5BKY9 247 aaKnown RBP6.83□□□□□ -1.32
VMP1-215ENST00000592619 FAM205BPQ63HN1 556 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 SLC22A25Q6T423 547 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 ATF7IPQ6VMQ6 1270 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 NOC3LQ8WTT2 800 aaKnown RBP6.83□□□□□ -1.32
VMP1-215ENST00000592619 RUFY2Q8WXA3 655 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 CAVIN3Q969G5 261 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 P2RY11Q96G91 374 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 HS6ST2Q96MM7 605 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 TIGD1Q96MW7 591 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 GPR78Q96P69 363 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 NPLQ9BXD5 320 aaPredicted RBP6.83□□□□□ -1.32
VMP1-215ENST00000592619 HDHD5Q9BXW7 423 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 USP44Q9H0E7 712 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 KRT84Q9NSB2 600 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 ZDHHC7Q9NXF8 308 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 NSMCE4AQ9NXX6 385 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 ST3GAL5Q9UNP4 418 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 PKP3Q9Y446 797 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 HFM1A2PYH4 1435 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 IQGAP3Q86VI3 1631 aa6.83□□□□□ -1.32
VMP1-215ENST00000592619 SALL3Q9BXA9 1300 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 ZNF142P52746 1687 aaPredicted RBP6.82□□□□□ -1.32
VMP1-215ENST00000592619 PZPP20742 1482 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 A0A1W2PRQ8 180 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 BTBD19C9JJ37 291 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 TMEM232C9JQI7 657 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 H7C1Q1 480 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 DSCR3O14972 297 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 SGPL1O95470 568 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 ENO1P06733 434 aaKnown RBP6.82□□□□□ -1.32
VMP1-215ENST00000592619 ADH4P08319 380 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 RFPL3SP0C7P2 107 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 RRM1P23921 792 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 GJC1P36383 396 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 STAT1P42224 750 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 DRG2P55039 364 aaKnown RBP6.82□□□□□ -1.32
VMP1-215ENST00000592619 ARF3P61204 181 aaPredicted RBP6.82□□□□□ -1.32
VMP1-215ENST00000592619 ARF1P84077 181 aaKnown RBP6.82□□□□□ -1.32
VMP1-215ENST00000592619 TDGQ13569 410 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 BYSLQ13895 437 aaKnown RBP6.82□□□□□ -1.32
VMP1-215ENST00000592619 SEMA3AQ14563 771 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 KCNB1Q14721 858 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 ZNF169Q14929 603 aaPredicted RBP6.82□□□□□ -1.32
VMP1-215ENST00000592619 LARS2Q15031 903 aaKnown RBP6.82□□□□□ -1.32
VMP1-215ENST00000592619 MEA1Q16626 185 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 SH2D4BQ5SQS7 431 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 SNX30Q5VWJ9 437 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 GJB7Q6PEY0 223 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 VSTM1Q6UX27 236 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 DCDC5Q6ZRR9 648 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 SLC29A4Q7RTT9 530 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 TMEM200AQ86VY9 491 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 BRSK2Q8IWQ3 736 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 ULK2Q8IYT8 1036 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 CREB3L4Q8TEY5 395 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 DAZAP1Q96EP5 407 aaKnown RBP6.82□□□□□ -1.32
VMP1-215ENST00000592619 C5orf34Q96MH7 638 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 NR1H4Q96RI1 486 aaPredicted RBP6.82□□□□□ -1.32
VMP1-215ENST00000592619 EYA3Q99504 573 aa6.82□□□□□ -1.32
VMP1-215ENST00000592619 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms