RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ATP11CQ8NB49 1132 aa19.32■□□□□ 0.68
CCDC43-205ENST00000592333 OR2A12Q8NGT7 310 aa19.32■□□□□ 0.68
CCDC43-205ENST00000592333 TSC1Q92574 1164 aa19.32■□□□□ 0.68
CCDC43-205ENST00000592333 CNDP2Q96KP4 475 aaKnown RBP19.32■□□□□ 0.68
CCDC43-205ENST00000592333 PSMB7Q99436 277 aa19.32■□□□□ 0.68
CCDC43-205ENST00000592333 CEP44Q9C0F1 390 aa19.32■□□□□ 0.68
CCDC43-205ENST00000592333 PPARGC1AQ9UBK2 798 aaKnown RBP19.32■□□□□ 0.68
CCDC43-205ENST00000592333 VPS51Q9UID3 782 aa19.32■□□□□ 0.68
CCDC43-205ENST00000592333 TMEM59LQ9UK28 342 aa19.32■□□□□ 0.68
CCDC43-205ENST00000592333 FHOD1Q9Y613 1164 aa19.32■□□□□ 0.68
CCDC43-205ENST00000592333 ZFYVE26Q68DK2 2539 aa19.32■□□□□ 0.68
CCDC43-205ENST00000592333 TP53BP1Q12888 1972 aaPredicted RBP19.32■□□□□ 0.68
CCDC43-205ENST00000592333 GOLGA8CPA6NN73 597 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 I6L893 689 aaPredicted RBP19.31■□□□□ 0.68
CCDC43-205ENST00000592333 OR1E1P30953 314 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 HNF1BP35680 557 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 METAP1P53582 386 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 IL9RQ01113 521 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 ALFQ53S48 1182 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 TCP11X2Q5H9J9 407 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 GATAD2AQ86YP4 633 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 TMEM145Q8NBT3 493 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 PPP1R16AQ96I34 528 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 TBCBQ99426 244 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 HDAC8Q9BY41 377 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 NUP62CLQ9H1M0 184 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 ANLNQ9NQW6 1124 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 DYRK4Q9NR20 520 aa19.31■□□□□ 0.68
CCDC43-205ENST00000592333 TRABD2BA6NFA1 517 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 ABCB7O75027 752 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 RFPL3O75679 317 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 MT-CO1P00395 513 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 PNMA6AP0CW24 399 aaPredicted RBP19.3■□□□□ 0.68
CCDC43-205ENST00000592333 TFE3P19532 575 aaPredicted RBP19.3■□□□□ 0.68
CCDC43-205ENST00000592333 ETFBP38117 255 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 RECQLP46063 649 aaPredicted RBP19.3■□□□□ 0.68
CCDC43-205ENST00000592333 TAS2R38P59533 333 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 NRG1Q02297 640 aaPredicted RBP19.3■□□□□ 0.68
CCDC43-205ENST00000592333 PIP5KL1Q5T9C9 394 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 KANSL1Q7Z3B3 1105 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 SPATS2Q86XZ4 545 aaKnown RBP19.3■□□□□ 0.68
CCDC43-205ENST00000592333 PLPP6Q8IY26 295 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 MDM1Q8TC05 714 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 EPS8L1Q8TE68 723 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 IFT43Q96FT9 208 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 KLHDC7BQ96G42 594 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 ZYG11BQ9C0D3 744 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 ACACAQ13085 2346 aa19.3■□□□□ 0.68
CCDC43-205ENST00000592333 ITPR1Q14643 2758 aa19.29■□□□□ 0.68
CCDC43-205ENST00000592333 F8VZ95 297 aa19.29■□□□□ 0.68
CCDC43-205ENST00000592333 FLT3P36888 993 aa19.29■□□□□ 0.68
CCDC43-205ENST00000592333 GGCXP38435 758 aa19.29■□□□□ 0.68
CCDC43-205ENST00000592333 ACADVLP49748 655 aa19.29■□□□□ 0.68
CCDC43-205ENST00000592333 NOMO3P69849 1222 aa19.29■□□□□ 0.68
CCDC43-205ENST00000592333 PRAMEF14Q5SWL7 426 aa19.29■□□□□ 0.68
CCDC43-205ENST00000592333 DHRS13Q6UX07 377 aa19.29■□□□□ 0.68
CCDC43-205ENST00000592333 ERN2Q76MJ5 926 aaKnown RBP19.29■□□□□ 0.68
CCDC43-205ENST00000592333 NOP9Q86U38 636 aaKnown RBP19.29■□□□□ 0.68
CCDC43-205ENST00000592333 DCP2Q8IU60 420 aaKnown RBP19.29■□□□□ 0.68
CCDC43-205ENST00000592333 PCDH20Q8N6Y1 951 aaKnown RBP19.29■□□□□ 0.68
CCDC43-205ENST00000592333 ENOX1Q8TC92 643 aaKnown RBP19.29■□□□□ 0.68
CCDC43-205ENST00000592333 ZNF212Q9UDV6 495 aa19.29■□□□□ 0.68
CCDC43-205ENST00000592333 IL36AQ9UHA7 158 aa19.29■□□□□ 0.68
CCDC43-205ENST00000592333 CACNA1GO43497 2377 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 A0A0D9SEW6 157 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 KPNA3O00505 521 aaPredicted RBP19.28■□□□□ 0.68
CCDC43-205ENST00000592333 SNAP91O60641 907 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 CTSLP07711 333 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 TPM2P07951 284 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 CKMT2P17540 419 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 MAT2AP31153 395 aaKnown RBP19.28■□□□□ 0.68
CCDC43-205ENST00000592333 ARL13BQ3SXY8 428 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 C22orf39Q6P5X5 142 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 CLEC17AQ6ZS10 378 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 HORMAD1Q86X24 394 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 EID2Q8N6I1 236 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 ISG20Q96AZ6 181 aaKnown RBP19.28■□□□□ 0.68
CCDC43-205ENST00000592333 KLHL11Q9NVR0 708 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 MPP6Q9NZW5 540 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 RALYQ9UKM9 306 aaKnown RBP19.28■□□□□ 0.68
CCDC43-205ENST00000592333 LAMA5O15230 3695 aa19.28■□□□□ 0.68
CCDC43-205ENST00000592333 APC2O95996 2303 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 A0A087WV48 116 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 PLK4O00444 970 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 PES1O00541 588 aaKnown RBP19.27■□□□□ 0.68
CCDC43-205ENST00000592333 BNIP3LO60238 219 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 ZMPSTE24O75844 475 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 CYP1A1P04798 512 aaPredicted RBP19.27■□□□□ 0.68
CCDC43-205ENST00000592333 JUPP14923 745 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 HNRNPA2B1P22626 353 aaKnown RBP19.27■□□□□ 0.68
CCDC43-205ENST00000592333 MMP8P22894 467 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 RRM1P23921 792 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 ACP1P24666 158 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 AKT2P31751 481 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 NUMBP49757 651 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 SERPINH1P50454 418 aaKnown RBP19.27■□□□□ 0.68
CCDC43-205ENST00000592333 GEMIN4P57678 1058 aaKnown RBP19.27■□□□□ 0.68
CCDC43-205ENST00000592333 CYP4F3Q08477 520 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 BNIP3Q12983 259 aa19.27■□□□□ 0.68
CCDC43-205ENST00000592333 ARTNQ5T4W7 220 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms