RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ADRA1AP35348 466 aa16.03■□□□□ 0.16
MBD1-227ENST00000592060 TIGD7Q6NT04 549 aaPredicted RBP16.03■□□□□ 0.16
MBD1-227ENST00000592060 CCDC117Q8IWD4 279 aaPredicted RBP16.03■□□□□ 0.16
MBD1-227ENST00000592060 ARHGAP18Q8N392 663 aa16.03■□□□□ 0.16
MBD1-227ENST00000592060 FAM193BQ96PV7 902 aaPredicted RBP16.03■□□□□ 0.16
MBD1-227ENST00000592060 MIPEPQ99797 713 aa16.03■□□□□ 0.16
MBD1-227ENST00000592060 FTHL17Q9BXU8 183 aa16.03■□□□□ 0.16
MBD1-227ENST00000592060 NMUR2Q9GZQ4 415 aa16.03■□□□□ 0.16
MBD1-227ENST00000592060 WWP1Q9H0M0 922 aa16.03■□□□□ 0.16
MBD1-227ENST00000592060 PRDM5Q9NQX1 630 aaPredicted RBP16.03■□□□□ 0.16
MBD1-227ENST00000592060 IARS2Q9NSE4 1012 aaKnown RBP16.03■□□□□ 0.16
MBD1-227ENST00000592060 MRPL42Q9Y6G3 142 aaKnown RBP16.03■□□□□ 0.16
MBD1-227ENST00000592060 FAM92AA1XBS5 289 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 TIMM44O43615 452 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 TADA2AO75478 443 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 SERPINE1P05121 402 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 KCNA4P22459 653 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 HOXD10P28358 340 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 ABCG1P45844 678 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 PAPOLAP51003 745 aaKnown RBP16.02■□□□□ 0.16
MBD1-227ENST00000592060 GEMP55040 296 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 WLSQ5T9L3 541 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 PDPK2PQ6A1A2 396 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 LRRC8DQ7L1W4 858 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 LONP2Q86WA8 852 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 LRRC49Q8IUZ0 686 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 C10orf107Q8IVU9 208 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 PLD6Q8N2A8 252 aaKnown RBP16.02■□□□□ 0.16
MBD1-227ENST00000592060 PXYLP1Q8TE99 480 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 ATXN7L3BQ96GX2 97 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 NSL1Q96IY1 281 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 PPP1R2P1Q96PQ5 205 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 FICDQ9BVA6 458 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 CFHR5Q9BXR6 569 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 STARD7Q9NQZ5 370 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 ZNF358Q9NW07 568 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 COPG2Q9UBF2 871 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 MARCOQ9UEW3 520 aaPredicted RBP16.02■□□□□ 0.16
MBD1-227ENST00000592060 MIA3Q5JRA6 1907 aa16.02■□□□□ 0.16
MBD1-227ENST00000592060 LYPLA1O75608 230 aaPredicted RBP16.02■□□□□ 0.15
MBD1-227ENST00000592060 PEX11BO96011 259 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 MPOP05164 745 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 KITP10721 976 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 TBX4P57082 545 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 GPNMBQ14956 572 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 CCDC153Q494R4 210 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 PREPLQ4J6C6 727 aaPredicted RBP16.02■□□□□ 0.15
MBD1-227ENST00000592060 CTXN3Q4LDR2 81 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 PCID2Q5JVF3 399 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 PKN3Q6P5Z2 889 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 ATG14Q6ZNE5 492 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.02■□□□□ 0.15
MBD1-227ENST00000592060 FAM13CQ8NE31 585 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 ACVR1CQ8NER5 493 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 IPMKQ8NFU5 416 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 OR6Y1Q8NGX8 325 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 PPP1R14CQ8TAE6 165 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 VPS39Q96JC1 886 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 ELAC1Q9H777 363 aaKnown RBP16.02■□□□□ 0.15
MBD1-227ENST00000592060 MARCH5Q9NX47 278 aa16.02■□□□□ 0.15
MBD1-227ENST00000592060 E2F8A0AVK6 867 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 OR6C75A6NL08 312 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 CAPN14A8MX76 684 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 ARVCFO00192 962 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 ATP5BP06576 529 aaKnown RBP16.01■□□□□ 0.15
MBD1-227ENST00000592060 SLC2A3P11169 496 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 SELPP16109 830 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 ARRB2P32121 409 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 SLC1A6P48664 564 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 AQP5P55064 265 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 CNTN4Q8IWV2 1026 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 UMODL1-AS1Q8N2C9 162 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 ATAD1Q8NBU5 361 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 RAET1EQ8TD07 263 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 FATE1Q969F0 183 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 SORT1Q99523 831 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 GPR22Q99680 433 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 SIKE1Q9BRV8 207 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 GPR62Q9BZJ7 368 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 CAB39LQ9H9S4 337 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 MRM3Q9HC36 420 aaKnown RBP16.01■□□□□ 0.15
MBD1-227ENST00000592060 RBM22Q9NW64 420 aaKnown RBP eCLIP16.01■□□□□ 0.15
MBD1-227ENST00000592060 NSMCE4AQ9NXX6 385 aa16.01■□□□□ 0.15
MBD1-227ENST00000592060 A0A096LPK6 155 aa16■□□□□ 0.15
MBD1-227ENST00000592060 CCDC22O60826 627 aa16■□□□□ 0.15
MBD1-227ENST00000592060 NBNO60934 754 aa16■□□□□ 0.15
MBD1-227ENST00000592060 VNN2O95498 520 aa16■□□□□ 0.15
MBD1-227ENST00000592060 INHAP05111 366 aa16■□□□□ 0.15
MBD1-227ENST00000592060 FGFR3P22607 806 aa16■□□□□ 0.15
MBD1-227ENST00000592060 CALB2P22676 271 aa16■□□□□ 0.15
MBD1-227ENST00000592060 APLP1P51693 650 aa16■□□□□ 0.15
MBD1-227ENST00000592060 IRF9Q00978 393 aa16■□□□□ 0.15
MBD1-227ENST00000592060 DLG2Q15700 870 aa16■□□□□ 0.15
MBD1-227ENST00000592060 MS4A13Q5J8X5 152 aa16■□□□□ 0.15
MBD1-227ENST00000592060 FAM171A1Q5VUB5 890 aa16■□□□□ 0.15
MBD1-227ENST00000592060 ZNF280DQ6N043 979 aa16■□□□□ 0.15
MBD1-227ENST00000592060 ZC3HC1Q86WB0 502 aaKnown RBP16■□□□□ 0.15
MBD1-227ENST00000592060 MRGPRX2Q96LB1 330 aa16■□□□□ 0.15
MBD1-227ENST00000592060 CASD1Q96PB1 797 aa16■□□□□ 0.15
MBD1-227ENST00000592060 XRN2Q9H0D6 950 aaKnown RBP eCLIP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms