RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 UBASH3AP57075 661 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 ARF5P84085 180 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 BNC1Q01954 994 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 SCAPQ12770 1279 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 SEMA3BQ13214 749 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 TDRD12Q587J7 1177 aaKnown RBP15.54■□□□□ 0.08
ERCC1-213ENST00000592023 EFHC2Q5JST6 749 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 FAM46CQ5VWP2 391 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 PPP1R2P3Q6NXS1 205 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.54■□□□□ 0.08
ERCC1-213ENST00000592023 NLRP14Q86W24 1093 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 PYROXD2Q8N2H3 581 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 GRIN3AQ8TCU5 1115 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 CCDC114Q96M63 670 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 SLC6A18Q96N87 628 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 ZDHHC5Q9C0B5 715 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 TNKS2Q9H2K2 1166 aa15.54■□□□□ 0.08
ERCC1-213ENST00000592023 TP53BP1Q12888 1972 aaPredicted RBP15.54■□□□□ 0.08
ERCC1-213ENST00000592023 DDX3XO00571 662 aaKnown RBP eCLIP15.53■□□□□ 0.081e-7■■□□□ 12.2
ERCC1-213ENST00000592023 MCF2LO15068 1137 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 RTN2O75298 545 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 ZMPSTE24O75844 475 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 CER1O95813 267 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 CTSLP07711 333 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 PSMA2P25787 234 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 ACVRL1P37023 503 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 PBX1P40424 430 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 GRIA4P48058 902 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 PPP2CBP62714 309 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 PPP2CAP67775 309 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 MAMLD1Q13495 774 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 TEAD4Q15561 434 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 FIGNQ5HY92 759 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 RETSATQ6NUM9 610 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 TMC6Q7Z403 805 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 ADAT2Q7Z6V5 191 aaKnown RBP15.53■□□□□ 0.08
ERCC1-213ENST00000592023 CHST14Q8NCH0 376 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 OR2A12Q8NGT7 310 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 ZNF653Q96CK0 615 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 VCPIP1Q96JH7 1222 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 ORAI3Q9BRQ5 295 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 SLC32A1Q9H598 525 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 GAREM1Q9H706 876 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 IL21RQ9HBE5 538 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 PARVAQ9NVD7 372 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 TMEM248Q9NWD8 314 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 PPM1HQ9ULR3 514 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 FCF1Q9Y324 198 aaKnown RBP15.53■□□□□ 0.08
ERCC1-213ENST00000592023 FARP1Q9Y4F1 1045 aaPredicted RBP15.53■□□□□ 0.08
ERCC1-213ENST00000592023 ACTL7AQ9Y615 435 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 ASCC3Q8N3C0 2202 aaKnown RBP15.53■□□□□ 0.08
ERCC1-213ENST00000592023 LAMA1P25391 3075 aa15.53■□□□□ 0.08
ERCC1-213ENST00000592023 TMEM131Q92545 1883 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 SPTBN2O15020 2390 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 A0A1W2PPC4 97 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 KPNA3O00505 521 aaPredicted RBP15.52■□□□□ 0.08
ERCC1-213ENST00000592023 CREB3O43889 395 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 RAMP2O60895 175 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 GJB3O75712 270 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 CEACAM1P13688 526 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 CD59P13987 128 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 EPHB2P29323 1055 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 CHRNA3P32297 505 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 ETFBP38117 255 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 RECQLP46063 649 aaPredicted RBP15.52■□□□□ 0.08
ERCC1-213ENST00000592023 CNTN1Q12860 1018 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 AGBL4Q5VU57 503 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 PLEKHA7Q6IQ23 1121 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 PIP4P1Q86T03 277 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 ARHGEF2Q92974 986 aaKnown RBP15.52■□□□□ 0.08
ERCC1-213ENST00000592023 FAM131CQ96AQ9 280 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 EBF2Q9HAK2 575 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 OSGEPQ9NPF4 335 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 GPATCH2LQ9NWQ4 482 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 IFNKQ9P0W0 207 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 CNOT8Q9UFF9 292 aaKnown RBP15.52■□□□□ 0.08
ERCC1-213ENST00000592023 FZD10Q9ULW2 581 aa15.52■□□□□ 0.08
ERCC1-213ENST00000592023 FNDC3AQ9Y2H6 1198 aaKnown RBP15.52■□□□□ 0.08
ERCC1-213ENST00000592023 CACNA1EQ15878 2313 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 NCOR2Q9Y618 2525 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 TBC1D3DA0A087WVF3 549 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 TBC1D3IA0A087WXS9 549 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 TBC1D3EA0A087X179 549 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 TBC1D3KA0A087X1G2 549 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 A0A1W2PQJ5 194 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 TBC1D3FA6NER0 549 aaPredicted RBP15.51■□□□□ 0.07
ERCC1-213ENST00000592023 TBC1D3LB9A6J9 549 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 SLC7A4O43246 635 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 PLRG1O43660 514 aaKnown RBP15.51■□□□□ 0.07
ERCC1-213ENST00000592023 FTLP02792 175 aaPredicted RBP15.51■□□□□ 0.07
ERCC1-213ENST00000592023 TBC1D3HP0C7X1 549 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 PMLP29590 882 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 L1CAMP32004 1257 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 DNA2P51530 1060 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 CCR5P51681 352 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 KIF19Q2TAC6 998 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 SKOR2Q2VWA4 1001 aaPredicted RBP15.51■□□□□ 0.07
ERCC1-213ENST00000592023 HLA-BQ31612 363 aa15.51■□□□□ 0.07
ERCC1-213ENST00000592023 TBC1D3GQ6DHY5 549 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms