RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 A0A1B0GTW7 788 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 ILVBLA1L0T0 632 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 TARSL2A2RTX5 802 aaKnown RBP14.25□□□□□ -0.13
CLIP3-205ENST00000592017 AKR1B15C9JRZ8 316 aaPredicted RBP14.25□□□□□ -0.13
CLIP3-205ENST00000592017 AKR1B10O60218 316 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 PRPSAP2O60256 369 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 RNASEH1O60930 286 aaKnown RBP14.25□□□□□ -0.13
CLIP3-205ENST00000592017 SYPP08247 313 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 L1CAMP32004 1257 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 PSMD8P48556 350 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 ATXN3P54252 364 aaPredicted RBP14.25□□□□□ -0.13
CLIP3-205ENST00000592017 AIF1P55008 147 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 BNC1Q01954 994 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 GNA12Q03113 381 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 ZNF783Q6ZMS7 281 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 Q6ZVU0 165 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 NLRP14Q86W24 1093 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 ZNF354CQ86Y25 554 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 CNGA4Q8IV77 575 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 MMAAQ8IVH4 418 aaKnown RBP14.25□□□□□ -0.13
CLIP3-205ENST00000592017 STK40Q8N2I9 435 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 ARFGAP1Q8N6T3 406 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 ATP11CQ8NB49 1132 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 FNIP1Q8TF40 1166 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 BTBD6Q96KE9 485 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 PEBP4Q96S96 227 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 SNRNP25Q9BV90 132 aaKnown RBP14.25□□□□□ -0.13
CLIP3-205ENST00000592017 PCED1AQ9H1Q7 454 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 PABPC3Q9H361 631 aaKnown RBP14.25□□□□□ -0.13
CLIP3-205ENST00000592017 DHX35Q9H5Z1 703 aaKnown RBP14.25□□□□□ -0.13
CLIP3-205ENST00000592017 NDFIP2Q9NV92 336 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 TMEM248Q9NWD8 314 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 ZNF212Q9UDV6 495 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 SERGEFQ9UGK8 458 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 SUSD2Q9UGT4 822 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 ANAPC7Q9UJX3 599 aa14.25□□□□□ -0.13
CLIP3-205ENST00000592017 UPK3BL1B0FP48 263 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 UPK3BL2E5RIL1 263 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 BCAT2O15382 392 aaPredicted RBP14.24□□□□□ -0.13
CLIP3-205ENST00000592017 RAMP2O60895 175 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 LRCH4O75427 683 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 GJB3O75712 270 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 SEMA4FO95754 770 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 MT-CO1P00395 513 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 CEACAM1P13688 526 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 CD59P13987 128 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 MIPP30301 263 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 ACVRL1P37023 503 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 MAPKAPK2P49137 400 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 GALCP54803 685 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 TPI1P60174 286 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 GRIK2Q13002 908 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 DLG2Q15700 870 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 CST6Q15828 149 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 SLC18A3Q16572 532 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 CA9Q16790 459 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 GAS2L3Q86XJ1 694 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 SH2D3CQ8N5H7 860 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 FRS2Q8WU20 508 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 PTPRN2Q92932 1015 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 CHP1Q99653 195 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 PACSIN1Q9BY11 444 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 BTBD1Q9H0C5 482 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 SPTLC3Q9NUV7 552 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 DNAAF2Q9NVR5 837 aaKnown RBP14.24□□□□□ -0.13
CLIP3-205ENST00000592017 FBXL12Q9NXK8 326 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.24□□□□□ -0.13
CLIP3-205ENST00000592017 CKAP5Q14008 2032 aa14.24□□□□□ -0.13
CLIP3-205ENST00000592017 ASCC3Q8N3C0 2202 aaKnown RBP14.23□□□□□ -0.13
CLIP3-205ENST00000592017 TNRC6BQ9UPQ9 1833 aaKnown RBP14.23□□□□□ -0.13
CLIP3-205ENST00000592017 SSU72P8A0A1W2PR75 194 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 K7ERQ8 282 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 EEF2KO00418 725 aaKnown RBP14.23□□□□□ -0.13
CLIP3-205ENST00000592017 MID1O15344 667 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 ATP9BO43861 1147 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 OPHN1O60890 802 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 IL1BP01584 269 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 CYP1A2P05177 515 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 SRCP12931 536 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 SLC8A1P32418 973 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 ETFBP38117 255 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 SSR1P43307 286 aaKnown RBP14.23□□□□□ -0.13
CLIP3-205ENST00000592017 ZNF75DP51815 510 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 SHC2P98077 582 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
CLIP3-205ENST00000592017 ELAVL3Q14576 367 aaKnown RBP14.23□□□□□ -0.13
CLIP3-205ENST00000592017 SMTNL2Q2TAL5 461 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 PPP6R3Q5H9R7 873 aaPredicted RBP14.23□□□□□ -0.13
CLIP3-205ENST00000592017 ERMARDQ5T6L9 678 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 RETSATQ6NUM9 610 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 HDDC3Q8N4P3 179 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 RTL3Q8N8U3 475 aaKnown RBP14.23□□□□□ -0.13
CLIP3-205ENST00000592017 ZNF564Q8TBZ8 553 aaPredicted RBP14.23□□□□□ -0.13
CLIP3-205ENST00000592017 CTNNBL1Q8WYA6 563 aaPredicted RBP14.23□□□□□ -0.13
CLIP3-205ENST00000592017 OR8D1Q8WZ84 308 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 SNX19Q92543 992 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 BIRC7Q96CA5 298 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 CCDC42Q96M95 316 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 ORAI3Q9BRQ5 295 aa14.23□□□□□ -0.13
CLIP3-205ENST00000592017 NEUROG2Q9H2A3 272 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms