RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 ATP6V0D2Q8N8Y2 350 aa18.45■□□□□ 0.54
VAT1-208ENST00000590924 JOSD2Q8TAC2 188 aa18.45■□□□□ 0.54
VAT1-208ENST00000590924 FNIP1Q8TF40 1166 aa18.45■□□□□ 0.54
VAT1-208ENST00000590924 SETD7Q8WTS6 366 aaKnown RBP18.45■□□□□ 0.54
VAT1-208ENST00000590924 RXFP2Q8WXD0 754 aa18.45■□□□□ 0.54
VAT1-208ENST00000590924 CTNNBL1Q8WYA6 563 aaPredicted RBP18.45■□□□□ 0.54
VAT1-208ENST00000590924 PDLIM2Q96JY6 352 aa18.45■□□□□ 0.54
VAT1-208ENST00000590924 ORAI3Q9BRQ5 295 aa18.45■□□□□ 0.54
VAT1-208ENST00000590924 THAP2Q9H0W7 228 aa18.45■□□□□ 0.54
VAT1-208ENST00000590924 SPTLC3Q9NUV7 552 aa18.45■□□□□ 0.54
VAT1-208ENST00000590924 FBXL12Q9NXK8 326 aa18.45■□□□□ 0.54
VAT1-208ENST00000590924 PAXBP1Q9Y5B6 917 aa18.45■□□□□ 0.54
VAT1-208ENST00000590924 KNTC1P50748 2209 aa18.45■□□□□ 0.54
VAT1-208ENST00000590924 EDDM13A0A1B0GTR0 161 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 KCNU1A8MYU2 1149 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 F5H5T6 163 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 M0QYT0 321 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 FSBPO95073 299 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 IPO7O95373 1038 aaKnown RBP18.44■□□□□ 0.54
VAT1-208ENST00000590924 IGHV4-34P06331 123 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 DESP17661 470 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 ABCB4P21439 1286 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 GPD1P21695 349 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 SDC4P31431 198 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 CTSOP43234 321 aaPredicted RBP18.44■□□□□ 0.54
VAT1-208ENST00000590924 ZNF143P52747 638 aaPredicted RBP18.44■□□□□ 0.54
VAT1-208ENST00000590924 ECT2LQ008S8 904 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 SLC12A1Q13621 1099 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 KIAA0895LQ68EN5 471 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 TRNP1Q6NT89 227 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 STRADAQ7RTN6 431 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 CENPIQ92674 756 aaPredicted RBP18.44■□□□□ 0.54
VAT1-208ENST00000590924 IGSF8Q969P0 613 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 PRMT1Q99873 361 aaKnown RBP18.44■□□□□ 0.54
VAT1-208ENST00000590924 CNPY3Q9BT09 278 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 DDIT4Q9NX09 232 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 SERGEFQ9UGK8 458 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 LCMT1Q9UIC8 334 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 FZD4Q9ULV1 537 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 ANKRD6Q9Y2G4 727 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 SNX11Q9Y5W9 270 aa18.44■□□□□ 0.54
VAT1-208ENST00000590924 ARID1BQ8NFD5 2236 aaPredicted RBP18.43■□□□□ 0.54
VAT1-208ENST00000590924 A0A1B0GVM2 712 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 TCAF2A6NFQ2 919 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 SOWAHDA6NJG2 315 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 SRRM3A6NNA2 597 aaPredicted RBP18.43■□□□□ 0.54
VAT1-208ENST00000590924 TTC34A8MYJ7 566 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 MID1O15344 667 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 CCR1P32246 355 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 MAGEA1P43355 309 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 CXCR3P49682 368 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 SULT1E1P49888 294 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 RPL7AP62424 266 aaKnown RBP18.43■□□□□ 0.54
VAT1-208ENST00000590924 ACAP1Q15027 740 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 TCEAL1Q15170 157 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 CCDC14Q49A88 953 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 BRMS1LQ5PSV4 323 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 ACBD5Q5T8D3 534 aaPredicted RBP18.43■□□□□ 0.54
VAT1-208ENST00000590924 TTC39BQ5VTQ0 682 aaPredicted RBP18.43■□□□□ 0.54
VAT1-208ENST00000590924 RNF219Q5W0B1 726 aaPredicted RBP18.43■□□□□ 0.54
VAT1-208ENST00000590924 SND1Q7KZF4 910 aaKnown RBP eCLIP18.43■□□□□ 0.54
VAT1-208ENST00000590924 DNAAF5Q86Y56 855 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 LRRC8AQ8IWT6 810 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 APCDD1Q8J025 514 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 EMC1Q8N766 993 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 GANCQ8TET4 914 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 MCEEQ96PE7 176 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 TBCBQ99426 244 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 CDC6Q99741 560 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 NCAPGQ9BPX3 1015 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 FAM204AQ9H8W3 233 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 UVRAGQ9P2Y5 699 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 MYO1AQ9UBC5 1043 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 SLC12A6Q9UHW9 1150 aa18.43■□□□□ 0.54
VAT1-208ENST00000590924 FREM2Q5SZK8 3169 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 A0A1W2PP55 124 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 C10orf142B7Z368 130 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 NRDCO43847 1150 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 RACK1P63244 317 aaKnown RBP18.42■□□□□ 0.54
VAT1-208ENST00000590924 KRT83P78385 493 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 DEUP1Q05D60 604 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 SUZ12Q15022 739 aaKnown RBP18.42■□□□□ 0.54
VAT1-208ENST00000590924 LAYNQ6UX15 382 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 RAD9BQ6WBX8 426 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 SLCO6A1Q86UG4 719 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 MMAAQ8IVH4 418 aaKnown RBP18.42■□□□□ 0.54
VAT1-208ENST00000590924 CCAR2Q8N163 923 aaKnown RBP18.42■□□□□ 0.54
VAT1-208ENST00000590924 PNPLA1Q8N8W4 532 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 PTPRN2Q92932 1015 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 CFAP57Q96MR6 1250 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 FAM129BQ96TA1 746 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 SLCO3A1Q9UIG8 710 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 PCDHA13Q9Y5I0 950 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 ADAMTS20P59510 1910 aa18.42■□□□□ 0.54
VAT1-208ENST00000590924 ANKRD11Q6UB99 2663 aaPredicted RBP18.42■□□□□ 0.54
VAT1-208ENST00000590924 MYLKQ15746 1914 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 CHD5Q8TDI0 1954 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 A0A1W2PPC4 97 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 FAM47DPA6NHR8 397 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 LRRC72A6NJI9 287 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms