RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ADRA1BP35368 520 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 DHPSP49366 369 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 STK19P49842 368 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 TPMTP51580 245 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 ZNF143P52747 638 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 RPS14P62263 151 aaKnown RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 RPL7AP62424 266 aaKnown RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 ARHGAP8P85298 464 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 OGDHQ02218 1023 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 RPL6Q02878 288 aaKnown RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 KLHL30Q0D2K2 578 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 SCAPQ12770 1279 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 ZNF177Q13360 481 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 CDO1Q16878 200 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 C9orf64Q5T6V5 341 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 TCEAL6Q6IPX3 200 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 PLEKHA7Q6IQ23 1121 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 PPP1R2P3Q6NXS1 205 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 DNAJC24Q6P3W2 148 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 LRSAM1Q6UWE0 723 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 SLC41A1Q8IVJ1 513 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 FAM172AQ8WUF8 416 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 PRCCQ92733 491 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 SYN2Q92777 582 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 TCEAL3Q969E4 200 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 NTAN1Q96AB6 310 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 PSMB7Q99436 277 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 RSPH9Q9H1X1 276 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 RXFP3Q9NSD7 469 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 CUEDC1Q9NWM3 386 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 WSB2Q9NYS7 404 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 MPP6Q9NZW5 540 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 PPARGC1AQ9UBK2 798 aaKnown RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 SUN2Q9UH99 717 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 SLCO3A1Q9UIG8 710 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 NCOR2Q9Y618 2525 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 ASCC3Q8N3C0 2202 aaKnown RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 TTC34A8MYJ7 566 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 AP5Z1O43299 807 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 SIN3BO75182 1162 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 GYPCP04921 128 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 SKILP12757 684 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 GPC1P35052 558 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 ID4P47928 161 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 NUMBP49757 651 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 ST8SIA6P61647 398 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 ZBED6P86452 979 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 ZBTB16Q05516 673 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 SULT2A1Q06520 285 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 MAMLD1Q13495 774 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 NFKBIBQ15653 356 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 RSPO4Q2I0M5 234 aaPredicted RBP11.5□□□□□ -0.57
SMAD4-211ENST00000590499 LYSMD4Q5XG99 296 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 LRRC31Q6UY01 552 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 ARMCX6Q7L4S7 300 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 SETD3Q86TU7 594 aaPredicted RBP11.5□□□□□ -0.57
SMAD4-211ENST00000590499 CACUL1Q86Y37 369 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 DNAAF5Q86Y56 855 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 CCDC185Q8N715 623 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 FRS2Q8WU20 508 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 IQCDQ96DY2 449 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 TOE1Q96GM8 510 aaKnown RBP11.5□□□□□ -0.57
SMAD4-211ENST00000590499 ZNF419Q96HQ0 510 aaPredicted RBP11.5□□□□□ -0.57
SMAD4-211ENST00000590499 RPL10LQ96L21 214 aaKnown RBP11.5□□□□□ -0.57
SMAD4-211ENST00000590499 MCEEQ96PE7 176 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 MAGEB5Q9BZ81 275 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 XPO4Q9C0E2 1151 aaKnown RBP11.5□□□□□ -0.57
SMAD4-211ENST00000590499 OSBPL2Q9H1P3 480 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 TSPY26PQ9H489 355 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 TMEM74BQ9NUR3 256 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 PILRBQ9UKJ0 227 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 CAPN11Q9UMQ6 739 aa11.5□□□□□ -0.57
SMAD4-211ENST00000590499 EDDM13A0A1B0GTR0 161 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 TARSL2A2RTX5 802 aaKnown RBP11.49□□□□□ -0.57
SMAD4-211ENST00000590499 TMCO5BA8MYB1 307 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 PATE3B3GLJ2 98 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 FAM72CH0Y354 149 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 ATP9BO43861 1147 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 RHOCP08134 193 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 VAV1P15498 845 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 ITPKAP23677 461 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 OXTRP30559 389 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 HOXD12P35452 270 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 LIMK1P53667 647 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 ZNF33AQ06730 810 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 ZNF252P-AS1Q0IIN9 211 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 ARL13BQ3SXY8 428 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 FAM72AQ5TYM5 149 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 RNF219Q5W0B1 726 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-211ENST00000590499 ZNF776Q68DI1 518 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-211ENST00000590499 FAM72DQ6L9T8 149 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 TFAP2DQ7Z6R9 452 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 NLRP14Q86W24 1093 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 FAM72BQ86X60 149 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 SYT12Q8IV01 421 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 DCAF4L2Q8NA75 395 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 NETO1Q8TDF5 533 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 PIGKQ92643 395 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 PTPRN2Q92932 1015 aa11.49□□□□□ -0.57
SMAD4-211ENST00000590499 HSPA12BQ96MM6 686 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms