RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 RBM15Q96T37 977 aaKnown RBP eCLIP17.79■□□□□ 0.442e-6■■■□□ 15.8
CXXC1-212ENST00000589940 LINC00597Q9H2U6 94 aa17.79■□□□□ 0.44
CXXC1-212ENST00000589940 TRPV4Q9HBA0 871 aa17.79■□□□□ 0.44
CXXC1-212ENST00000589940 EIF2B3Q9NR50 452 aaKnown RBP17.79■□□□□ 0.44
CXXC1-212ENST00000589940 PLK2Q9NYY3 685 aa17.79■□□□□ 0.44
CXXC1-212ENST00000589940 NEBLO76041 1014 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 VIPR2P41587 438 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 CDK16Q00536 496 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 COL19A1Q14993 1142 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 TMEM25Q86YD3 366 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 TEX26Q8N6G2 289 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 IRF7Q92985 503 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 FRMD8Q9BZ67 464 aaPredicted RBP17.78■□□□□ 0.44
CXXC1-212ENST00000589940 PHACTR1Q9C0D0 580 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 SPHK2Q9NRA0 654 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 DNAJC17Q9NVM6 304 aaKnown RBP17.78■□□□□ 0.44
CXXC1-212ENST00000589940 CDH7Q9ULB5 785 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 HPCAL4Q9UM19 191 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 WNT6Q9Y6F9 365 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 MAP2K7O14733 419 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 CACNG3O60359 315 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 PENKP01210 267 aaPredicted RBP17.78■□□□□ 0.44
CXXC1-212ENST00000589940 HLA-DQB2P05538 268 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 PMS2P54278 862 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 ARL4CP56559 192 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 TNK2Q07912 1038 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 SLC10A7Q0GE19 358 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 TMCO4Q5TGY1 634 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 EP400NLQ6ZTU2 488 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 ADGRG2Q8IZP9 1017 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 MCUQ8NE86 351 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 RIPOR3Q96MK2 946 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 GORASP1Q9BQQ3 440 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 FEM1AQ9BSK4 669 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 GLOD4Q9HC38 313 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 TTLL3Q9Y4R7 772 aa17.78■□□□□ 0.44
CXXC1-212ENST00000589940 MYO18AQ92614 2054 aaKnown RBP17.77■□□□□ 0.44
CXXC1-212ENST00000589940 SPTBN5Q9NRC6 3674 aaKnown RBP17.77■□□□□ 0.44
CXXC1-212ENST00000589940 SASH3O75995 380 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 IGFBP4P22692 258 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 MZF1P28698 734 aaPredicted RBP17.77■□□□□ 0.44
CXXC1-212ENST00000589940 LTBRP36941 435 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 HSD17B3P37058 310 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 MMP13P45452 471 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 IFNAR2P48551 515 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 LMAN1P49257 510 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 NUMBP49757 651 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 LBRQ14739 615 aaKnown RBP17.77■□□□□ 0.44
CXXC1-212ENST00000589940 SPDYCQ5MJ68 293 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 CENPUQ71F23 418 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 RELL1Q8IUW5 271 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 PDIK1LQ8N165 341 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 PDCD7Q8N8D1 485 aaKnown RBP17.77■□□□□ 0.44
CXXC1-212ENST00000589940 FIBINQ8TAL6 211 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 VIPAS39Q9H9C1 493 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 OBP2AQ9NY56 170 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 OR51B4Q9Y5P0 310 aa17.77■□□□□ 0.44
CXXC1-212ENST00000589940 CSKP41240 450 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 UAP1Q16222 522 aaPredicted RBP17.76■□□□□ 0.43
CXXC1-212ENST00000589940 OTOP3Q7RTS5 596 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 BPIFB1Q8TDL5 484 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 OSCP1Q8WVF1 389 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 SERPINB12Q96P63 405 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 FCRL5Q96RD9 977 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 BBS2Q9BXC9 721 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 DUS2Q9NX74 493 aaKnown RBP17.76■□□□□ 0.43
CXXC1-212ENST00000589940 MARK1Q9P0L2 795 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 VPS28Q9UK41 221 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 CLEC4EQ9ULY5 219 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 ERI2A8K979 691 aaKnown RBP17.76■□□□□ 0.43
CXXC1-212ENST00000589940 NEDD8-MDP1E9PL57 170 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 CBX4O00257 560 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 GLDCP23378 1020 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 SARNPP82979 210 aaKnown RBP17.76■□□□□ 0.43
CXXC1-212ENST00000589940 PRPSAP1Q14558 356 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 LY6G5CQ5SRR4 150 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 FNBP1LQ5T0N5 605 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 LEKR1Q6ZMV7 388 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 TRMT10CQ7L0Y3 403 aaKnown RBP17.76■□□□□ 0.43
CXXC1-212ENST00000589940 UBLCP1Q8WVY7 318 aaPredicted RBP17.76■□□□□ 0.43
CXXC1-212ENST00000589940 ALG14Q96F25 216 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 MSLNLQ96KJ4 702 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 PPP1R2P1Q96PQ5 205 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 PABPC3Q9H361 631 aaKnown RBP17.76■□□□□ 0.43
CXXC1-212ENST00000589940 SEMA4AQ9H3S1 761 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 SAYSD1Q9NPB0 183 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 NT5MQ9NPB1 228 aa17.76■□□□□ 0.43
CXXC1-212ENST00000589940 KIAA1522Q9P206 1035 aaPredicted RBP17.76■□□□□ 0.43
CXXC1-212ENST00000589940 UBA2Q9UBT2 640 aaPredicted RBP17.76■□□□□ 0.43
CXXC1-212ENST00000589940 EIF3HO15372 352 aaKnown RBP eCLIP17.75■□□□□ 0.437e-7■■■□□ 16.9
CXXC1-212ENST00000589940 AP2A1O95782 977 aa17.75■□□□□ 0.43
CXXC1-212ENST00000589940 FCARP24071 287 aa17.75■□□□□ 0.43
CXXC1-212ENST00000589940 MTHFRP42898 656 aa17.75■□□□□ 0.43
CXXC1-212ENST00000589940 RFTN1Q14699 578 aaPredicted RBP17.75■□□□□ 0.43
CXXC1-212ENST00000589940 KLHDC8BQ8IXV7 354 aa17.75■□□□□ 0.43
CXXC1-212ENST00000589940 DCAF4L2Q8NA75 395 aa17.75■□□□□ 0.43
CXXC1-212ENST00000589940 MLPHQ9BV36 600 aaPredicted RBP17.75■□□□□ 0.43
CXXC1-212ENST00000589940 CDC42EP4Q9H3Q1 356 aaKnown RBP17.75■□□□□ 0.43
CXXC1-212ENST00000589940 XAB2Q9HCS7 855 aaKnown RBP17.75■□□□□ 0.43
CXXC1-212ENST00000589940 GOLGA6CA6NDK9 693 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms