RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	ATP5C1	P36542	298 aa	Known RBP	15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	FDFT1	P37268	417 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZNF33A	Q06730	810 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	PLD1	Q13393	1074 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	BBS9	Q3SYG4	887 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	NADSYN1	Q6IA69	706 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	FBXL22	Q6P050	247 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	LZTR1	Q8N653	840 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	PSMG2	Q969U7	264 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	MYEOV	Q96EZ4	313 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	TSGA13	Q96PP4	275 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	SLC39A8	Q9C0K1	460 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	IGSF9	Q9P2J2	1179 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZNF212	Q9UDV6	495 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	DNMT3L	Q9UJW3	386 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	TEX264	Q9Y6I9	313 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	SLC4A7	Q9Y6M7	1214 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	SMIM23	A6NLE4	172 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	TGM5	O43548	720 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	HNRNPCL1	O60812	293 aa	Known RBP	15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZNF189	O75820	626 aa	Predicted RBP	15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	STK10	O94804	968 aa	Known RBP	15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	SPATA31D3	P0C874	917 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	SP100	P23497	879 aa	Predicted RBP	15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	PSMB4	P28070	264 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	SLCO1A2	P46721	670 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	KPNA1	P52294	538 aa	Predicted RBP	15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	CREM	Q03060	361 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	VEPH1	Q14D04	833 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	ALF	Q53S48	1182 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	HECTD3	Q5T447	861 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	RAP1GAP2	Q684P5	730 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	TMEM154	Q6P9G4	183 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	LILRA6	Q6PI73	481 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	PPP1R21	Q6ZMI0	780 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	SPATA31D4	Q6ZUB0	917 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	FBXO36	Q8NEA4	188 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	PHOSPHO2	Q8TCD6	241 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	PYROXD1	Q8WU10	500 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	DNAJC9	Q8WXX5	260 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	IGSF8	Q969P0	613 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	FRMD8	Q9BZ67	464 aa	Predicted RBP	15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	VCX3B	Q9H321	246 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZNF334	Q9HCZ1	680 aa	Predicted RBP	15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	VCX3A	Q9NNX9	186 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	TRPM5	Q9NZQ8	1165 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	LRCH1	Q9Y2L9	728 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	CHD5	Q8TDI0	1954 aa		15.71	■□□□□ 0.11
DDX39A-209	ENST00000589318	TLDC2	A0PJX2	215 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	DRGX	A6NNA5	263 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318		F5H423	210 aa	Predicted RBP	15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	MTSS1	O43312	755 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	MAFK	O60675	156 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	CNTN5	O94779	1100 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	TPBGL	P0DKB5	382 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	RHOQ	P17081	205 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	GCA	P28676	217 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	CDC25C	P30307	473 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	CD68	P34810	354 aa	Predicted RBP	15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	GRIA1	P42261	906 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	TRIM68	Q6AZZ1	485 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	ZNF419	Q96HQ0	510 aa	Predicted RBP	15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	FERMT1	Q9BQL6	677 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	RNF38	Q9H0F5	515 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	TMEM248	Q9NWD8	314 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	EURL	Q9NYK6	297 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	CHD9	Q3L8U1	2897 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	MTCL1	Q9Y4B5	1905 aa	Known RBP	15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	C2orf78	A6NCI8	922 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	TLL1	O43897	1013 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	PENK	P01210	267 aa	Predicted RBP	15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	SSTR1	P30872	391 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	ELK3	P41970	407 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	EPHB3	P54753	998 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	ERVFC1	P60507	584 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	STAT4	Q14765	748 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	SETDB1	Q15047	1291 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	TEX44	Q53QW1	395 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	PID1	Q7Z2X4	250 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	UMODL1-AS1	Q8N2C9	162 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	CKAP2	Q8WWK9	683 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	LZIC	Q8WZA0	190 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	IFT43	Q96FT9	208 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	ZYG11B	Q9C0D3	744 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	IL21	Q9HBE4	155 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	EIF2B3	Q9NR50	452 aa	Known RBP	15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	PDP2	Q9P2J9	529 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	STOML1	Q9UBI4	398 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	CHMP2B	Q9UQN3	213 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	SSX2IP	Q9Y2D8	614 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	IRAK3	Q9Y616	596 aa		15.7	■□□□□ 0.1
DDX39A-209	ENST00000589318	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	DFFA	O00273	331 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	ZBTB24	O43167	697 aa	Predicted RBP	15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	PEX11A	O75192	247 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	CXCL14	O95715	111 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	F11	P03951	625 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	CCNC	P24863	283 aa		15.69	■□□□□ 0.1
DDX39A-209	ENST00000589318	DNAJB1	P25685	340 aa		15.69	■□□□□ 0.1

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