RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 EPS8L3Q8TE67 593 aaKnown RBP12.31□□□□□ -0.44
CCBE1-203ENST00000589116 SLC22A17Q8WUG5 538 aa12.31□□□□□ -0.44
CCBE1-203ENST00000589116 TLCD1Q96CP7 247 aa12.31□□□□□ -0.44
CCBE1-203ENST00000589116 MYEOVQ96EZ4 313 aa12.31□□□□□ -0.44
CCBE1-203ENST00000589116 PRICKLE1Q96MT3 831 aaPredicted RBP12.31□□□□□ -0.44
CCBE1-203ENST00000589116 FCRL5Q96RD9 977 aa12.31□□□□□ -0.44
CCBE1-203ENST00000589116 CYP2S1Q96SQ9 504 aa12.31□□□□□ -0.44
CCBE1-203ENST00000589116 GORASP1Q9BQQ3 440 aa12.31□□□□□ -0.44
CCBE1-203ENST00000589116 LMAN2LQ9H0V9 348 aa12.31□□□□□ -0.44
CCBE1-203ENST00000589116 LRRC40Q9H9A6 602 aa12.31□□□□□ -0.44
CCBE1-203ENST00000589116 SMPD4Q9NXE4 827 aa12.31□□□□□ -0.44
CCBE1-203ENST00000589116 ZDHHC7Q9NXF8 308 aa12.31□□□□□ -0.44
CCBE1-203ENST00000589116 ZMYM5Q9UJ78 669 aa12.31□□□□□ -0.44
CCBE1-203ENST00000589116 AAR2Q9Y312 384 aaKnown RBP12.31□□□□□ -0.44
CCBE1-203ENST00000589116 EXOC1LA0A1B0GW35 172 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 A0A1W2PRU2 124 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 TLDC2A0PJX2 215 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 TYW5A2RUC4 315 aaKnown RBP12.3□□□□□ -0.44
CCBE1-203ENST00000589116 GREM1O60565 184 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 ANXA9O76027 345 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 PEX11BO96011 259 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 CPP00450 1065 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 ETFBP38117 255 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 MMP13P45452 471 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 RASA2Q15283 850 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 KLHL38Q2WGJ6 581 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 TNFAIP8L3Q5GJ75 292 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 HP1BP3Q5SSJ5 553 aaPredicted RBP12.3□□□□□ -0.44
CCBE1-203ENST00000589116 FAM182AQ5T1J6 154 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 EMC10Q5UCC4 262 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 KCTD16Q68DU8 428 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 NAPEPLDQ6IQ20 393 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 TDRPQ86YL5 185 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 MAB21L3Q8N8X9 362 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 HJURPQ8NCD3 748 aaPredicted RBP12.3□□□□□ -0.44
CCBE1-203ENST00000589116 SIGLEC10Q96LC7 697 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 ZNF599Q96NL3 588 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 NAT9Q9BTE0 207 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 ACSS3Q9H6R3 686 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 GLOD4Q9HC38 313 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 HAUS2Q9NVX0 235 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 RBM22Q9NW64 420 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCBE1-203ENST00000589116 LGALS13Q9UHV8 139 aa12.3□□□□□ -0.44
CCBE1-203ENST00000589116 TCF20Q9UGU0 1960 aaKnown RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 ILVBLA1L0T0 632 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 GFRA2O00451 464 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 AVILO75366 819 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 HLA-DQB2P05538 268 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 BMP1P13497 986 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 EPCAMP16422 314 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 NR1D1P20393 614 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 SSTR1P30872 391 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 STX2P32856 288 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 GEMP55040 296 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 RPS24P62847 133 aaKnown RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 GNA12Q03113 381 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 ZNF177Q13360 481 aaPredicted RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 RAB30Q15771 203 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 LONRF1Q17RB8 773 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 ARHGAP15Q53QZ3 475 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 MARC1Q5VT66 337 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 ZNF783Q6ZMS7 281 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 C3orf62Q6ZUJ4 267 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 HTR3DQ70Z44 454 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 LINC00523Q86TU6 105 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 ZNF354CQ86Y25 554 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 CFAP52Q8N1V2 620 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 TEX26Q8N6G2 289 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 ARFGAP2Q8N6H7 521 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 USP33Q8TEY7 942 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 ARHGEF2Q92974 986 aaKnown RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 WBP2Q969T9 261 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 EBNA1BP2Q99848 306 aaKnown RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 MLPHQ9BV36 600 aaPredicted RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 BCCIPQ9P287 314 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 ZC3H7BQ9UGR2 993 aaKnown RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 SLC24A2Q9UI40 661 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 ARHGAP26Q9UNA1 814 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 TBC1D30Q9Y2I9 924 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 YBX2Q9Y2T7 364 aaKnown RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 SH3BP1Q9Y3L3 701 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 ATG2AQ2TAZ0 1938 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 SDR42E2A6NKP2 422 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 SMIM23A6NLE4 172 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 F5H423 210 aaPredicted RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 TRDMT1O14717 391 aaKnown RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 PRAMEF11O60813 436 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 RFPL2O75678 378 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 GRIA1P42261 906 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 GABPB1Q06547 395 aaPredicted RBP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 MTM1Q13496 603 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 TMCO4Q5TGY1 634 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 KDM7AQ6ZMT4 941 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 CAPN12Q6ZSI9 719 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 IGDCC3Q8IVU1 814 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 AGGF1Q8N302 714 aaeCLIP12.29□□□□□ -0.44
CCBE1-203ENST00000589116 MICALL1Q8N3F8 863 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 CPXM2Q8N436 756 aa12.29□□□□□ -0.44
CCBE1-203ENST00000589116 SH2D3CQ8N5H7 860 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms