RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ZKSCAN5Q9Y2L8 839 aa11.85□□□□□ -0.51
RFX1-204ENST00000588885 OR51B4Q9Y5P0 310 aa11.85□□□□□ -0.51
RFX1-204ENST00000588885 TP53BP1Q12888 1972 aaPredicted RBP11.85□□□□□ -0.51
RFX1-204ENST00000588885 PCNX2A6NKB5 2137 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 A0A1B0GVT2 93 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 SSU72P8A0A1W2PR75 194 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 C2CD4BA6NLJ0 364 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 KCNK3O14649 394 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 KRT37O76014 449 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 ENDOD1O94919 500 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 TNFAIP3P21580 790 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 GLDCP23378 1020 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 OR1E1P30953 314 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 ADRA1BP35368 520 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 GALCP54803 685 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 BNC1Q01954 994 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 ARTNQ5T4W7 220 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 RWDD4Q6NW29 188 aaKnown RBP11.84□□□□□ -0.51
RFX1-204ENST00000588885 NCEH1Q6PIU2 408 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 LAYNQ6UX15 382 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 Q6ZVU0 165 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 BNIPLQ7Z465 357 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 PHF13Q86YI8 300 aaPredicted RBP11.84□□□□□ -0.51
RFX1-204ENST00000588885 C17orf53Q8N3J3 647 aaPredicted RBP11.84□□□□□ -0.51
RFX1-204ENST00000588885 AADATQ8N5Z0 425 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 ATP11CQ8NB49 1132 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 OR7D4Q8NG98 312 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 OR14C36Q8NHC7 312 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 FAM172AQ8WUF8 416 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 RNF166Q96A37 237 aaPredicted RBP11.84□□□□□ -0.51
RFX1-204ENST00000588885 CAMK1GQ96NX5 476 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 HAPLN3Q96S86 360 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 PSMB7Q99436 277 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 SYT11Q9BT88 431 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 SGK2Q9HBY8 427 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 SPTLC3Q9NUV7 552 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 TAS2R14Q9NYV8 317 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 VPS51Q9UID3 782 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 SARDHQ9UL12 918 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.84□□□□□ -0.51
RFX1-204ENST00000588885 CACNA1EQ15878 2313 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 KNL1Q8NG31 2342 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 NUMA1Q14980 2115 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 CKAP5Q14008 2032 aa11.84□□□□□ -0.51
RFX1-204ENST00000588885 SPAARA0A1B0GVQ0 90 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 FAM72CH0Y354 149 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 CBX4O00257 560 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 SMAD6O43541 496 aaKnown RBP11.83□□□□□ -0.52
RFX1-204ENST00000588885 ATP9BO43861 1147 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 RTN2O75298 545 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 CALB1P05937 261 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 IGHV4-34P06331 123 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 GOT1P17174 413 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 GPD1P21695 349 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 RRM1P23921 792 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 DNA2P51530 1060 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 KRT83P78385 493 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 SEMA3BQ13214 749 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 ELAVL3Q14576 367 aaKnown RBP11.83□□□□□ -0.52
RFX1-204ENST00000588885 ASTE1Q2TB18 679 aaPredicted RBP11.83□□□□□ -0.52
RFX1-204ENST00000588885 ARL13BQ3SXY8 428 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 C6orf118Q5T5N4 469 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 FAM72AQ5TYM5 149 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 KIAA0895LQ68EN5 471 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 FAM72DQ6L9T8 149 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 DNAJC24Q6P3W2 148 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 SCYL2Q6P3W7 929 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 USP30Q70CQ3 517 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 ARCQ7LC44 396 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 FAM72BQ86X60 149 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 CCDC185Q8N715 623 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 C1orf216Q8TAB5 229 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 ZYG11BQ9C0D3 744 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 PCED1AQ9H1Q7 454 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 DEF6Q9H4E7 631 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 GAREM1Q9H706 876 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 TM9SF3Q9HD45 589 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 OR12D3Q9UGF7 316 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 SCML1Q9UN30 329 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 REXO2Q9Y3B8 237 aaKnown RBP11.83□□□□□ -0.52
RFX1-204ENST00000588885 EPG5Q9HCE0 2579 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 FRYQ5TBA9 3013 aa11.83□□□□□ -0.52
RFX1-204ENST00000588885 SPEGQ15772 3267 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 IGLV3-10A0A075B6K4 115 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 TBC1D3DA0A087WVF3 549 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 TBC1D3IA0A087WXS9 549 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 TBC1D3EA0A087X179 549 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 TBC1D3KA0A087X1G2 549 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 TBC1D3FA6NER0 549 aaPredicted RBP11.82□□□□□ -0.52
RFX1-204ENST00000588885 SIGLEC16A6NMB1 481 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 TBC1D3LB9A6J9 549 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 DDX3XO00571 662 aaKnown RBP eCLIP11.82□□□□□ -0.52
RFX1-204ENST00000588885 SH3BP5O60239 455 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 NDUFA10O95299 355 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 ADH1BP00325 375 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 CCDC172P0C7W6 258 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 TBC1D3HP0C7X1 549 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 SRCP12931 536 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 CEACAM1P13688 526 aa11.82□□□□□ -0.52
RFX1-204ENST00000588885 CD59P13987 128 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms