RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 HNRNPDQ14103 355 aaKnown RBP22.72■■□□□ 1.23
ATG4D-209ENST00000588857 CEP128Q6ZU80 1094 aa22.72■■□□□ 1.23
ATG4D-209ENST00000588857 CCDC25Q86WR0 208 aa22.72■■□□□ 1.23
ATG4D-209ENST00000588857 OR52K2Q8NGK3 314 aa22.72■■□□□ 1.23
ATG4D-209ENST00000588857 EXOC4Q96A65 974 aa22.72■■□□□ 1.23
ATG4D-209ENST00000588857 LINC00597Q9H2U6 94 aa22.72■■□□□ 1.23
ATG4D-209ENST00000588857 ATP13A1Q9HD20 1204 aa22.72■■□□□ 1.23
ATG4D-209ENST00000588857 RBM22Q9NW64 420 aaKnown RBP eCLIP22.72■■□□□ 1.23
ATG4D-209ENST00000588857 PLK2Q9NYY3 685 aa22.72■■□□□ 1.23
ATG4D-209ENST00000588857 IGSF9Q9P2J2 1179 aa22.72■■□□□ 1.23
ATG4D-209ENST00000588857 CDH7Q9ULB5 785 aa22.72■■□□□ 1.23
ATG4D-209ENST00000588857 WNT6Q9Y6F9 365 aa22.72■■□□□ 1.23
ATG4D-209ENST00000588857 SEMA5AQ13591 1074 aa22.71■■□□□ 1.23
ATG4D-209ENST00000588857 KCNJ11Q14654 390 aa22.71■■□□□ 1.23
ATG4D-209ENST00000588857 SLMAPQ14BN4 828 aa22.71■■□□□ 1.23
ATG4D-209ENST00000588857 MARC1Q5VT66 337 aa22.71■■□□□ 1.23
ATG4D-209ENST00000588857 ANKRD22Q5VYY1 191 aa22.71■■□□□ 1.23
ATG4D-209ENST00000588857 HDXQ7Z353 690 aa22.71■■□□□ 1.23
ATG4D-209ENST00000588857 TMEM25Q86YD3 366 aa22.71■■□□□ 1.23
ATG4D-209ENST00000588857 IRF7Q92985 503 aa22.71■■□□□ 1.23
ATG4D-209ENST00000588857 GBA3Q9H227 469 aa22.71■■□□□ 1.23
ATG4D-209ENST00000588857 F5H423 210 aaPredicted RBP22.7■■□□□ 1.22
ATG4D-209ENST00000588857 GOLGA8MH3BSY2 632 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 KDELR3O43731 214 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 PSMB4P28070 264 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 MTHFRP42898 656 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 MAGEA6P43360 314 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 FSCBQ5H9T9 825 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 SYCP2LQ5T4T6 812 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 FYB2Q5VWT5 728 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 PPP1R21Q6ZMI0 780 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 TMC3Q7Z5M5 1100 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 BPIFB1Q8TDL5 484 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 ZNF599Q96NL3 588 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 BBS2Q9BXC9 721 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 TRPV4Q9HBA0 871 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 SPHK2Q9NRA0 654 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 DUS2Q9NX74 493 aaKnown RBP22.7■■□□□ 1.22
ATG4D-209ENST00000588857 TTLL3Q9Y4R7 772 aa22.7■■□□□ 1.22
ATG4D-209ENST00000588857 TCRBV7S3A2A0A539 114 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 PEX11BO96011 259 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 PRPSAP1Q14558 356 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 PUS10Q3MIT2 529 aaKnown RBP22.69■■□□□ 1.22
ATG4D-209ENST00000588857 ADGRG2Q8IZP9 1017 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 CNTD1Q8N815 330 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 FIBINQ8TAL6 211 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 RSPRY1Q96DX4 576 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 UHRF1Q96T88 793 aaPredicted RBP22.69■■□□□ 1.22
ATG4D-209ENST00000588857 FEM1AQ9BSK4 669 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 ACE2Q9BYF1 805 aaPredicted RBP22.69■■□□□ 1.22
ATG4D-209ENST00000588857 ZNF446Q9NWS9 450 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 OBP2AQ9NY56 170 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 KIAA1522Q9P206 1035 aaPredicted RBP22.69■■□□□ 1.22
ATG4D-209ENST00000588857 VPS28Q9UK41 221 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 ATP8A1Q9Y2Q0 1164 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 TTC28Q96AY4 2481 aa22.69■■□□□ 1.22
ATG4D-209ENST00000588857 NEDD8-MDP1E9PL57 170 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 CBX4O00257 560 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 PPFIA2O75334 1257 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 TMEM63AO94886 807 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 NFKB1P19838 968 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 TPSB2P20231 275 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 CD68P34810 354 aaPredicted RBP22.68■■□□□ 1.22
ATG4D-209ENST00000588857 HSPA9P38646 679 aaKnown RBP22.68■■□□□ 1.22
ATG4D-209ENST00000588857 MMP13P45452 471 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 IFNAR2P48551 515 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 NUMBP49757 651 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 SLC10A7Q0GE19 358 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 LBRQ14739 615 aaKnown RBP22.68■■□□□ 1.22
ATG4D-209ENST00000588857 CASP8Q14790 479 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 TPSAB1Q15661 275 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 HIF1AQ16665 826 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 TMCO4Q5TGY1 634 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 MREGQ8N565 214 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 OSCP1Q8WVF1 389 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 PWWP2AQ96N64 755 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 LRRC3BQ96PB8 259 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 RBM15Q96T37 977 aaKnown RBP eCLIP22.68■■□□□ 1.22
ATG4D-209ENST00000588857 FRMD8Q9BZ67 464 aaPredicted RBP22.68■■□□□ 1.22
ATG4D-209ENST00000588857 HAUS2Q9NVX0 235 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 DENND4AQ7Z401 1863 aa22.68■■□□□ 1.22
ATG4D-209ENST00000588857 GRXCR2A6NFK2 248 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 PENKP01210 267 aaPredicted RBP22.67■■□□□ 1.22
ATG4D-209ENST00000588857 MZF1P28698 734 aaPredicted RBP22.67■■□□□ 1.22
ATG4D-209ENST00000588857 GBP2P32456 591 aaPredicted RBP22.67■■□□□ 1.22
ATG4D-209ENST00000588857 CSKP41240 450 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 ARL4CP56559 192 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 SARNPP82979 210 aaKnown RBP22.67■■□□□ 1.22
ATG4D-209ENST00000588857 CDK16Q00536 496 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 LY6G5CQ5SRR4 150 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 RNF43Q68DV7 783 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 PTCRAQ6ISU1 281 aaPredicted RBP22.67■■□□□ 1.22
ATG4D-209ENST00000588857 LEKR1Q6ZMV7 388 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 BBS5Q8N3I7 341 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 TEX26Q8N6G2 289 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 ZNF557Q8N988 423 aaPredicted RBP22.67■■□□□ 1.22
ATG4D-209ENST00000588857 WFDC5Q8TCV5 224 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 E2F7Q96AV8 911 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 MSLNLQ96KJ4 702 aa22.67■■□□□ 1.22
ATG4D-209ENST00000588857 PPP1R2P1Q96PQ5 205 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms