RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 DOCK6Q96HP0 2047 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 METTL18O95568 372 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 APRTP07741 180 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 MLNP12872 115 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 HOXD9P28356 352 aaPredicted RBP10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 MMP13P45452 471 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 GAD2Q05329 585 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 NR1H3Q13133 447 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 KCNJ11Q14654 390 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 LBRQ14739 615 aaKnown RBP10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 HIF1AQ16665 826 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 INO80DQ53TQ3 878 aaPredicted RBP10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 CFAP58Q5T655 872 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 PRPF38BQ5VTL8 546 aaKnown RBP10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 FYB2Q5VWT5 728 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 CXorf57Q6NSI4 855 aaKnown RBP10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 EP400NLQ6ZTU2 488 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 MTSS1LQ765P7 747 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 PRUNE1Q86TP1 453 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 PRCCQ92733 491 aaPredicted RBP10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 ATP2A3Q93084 1043 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 TTC25Q96NG3 672 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 AGAP3Q96P47 875 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 FCRL5Q96RD9 977 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 APOL5Q9BWW9 433 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 BBS2Q9BXC9 721 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 VPS45Q9NRW7 570 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 UBA2Q9UBT2 640 aaPredicted RBP10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 SEPT3Q9UH03 358 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 VPS28Q9UK41 221 aa10.78□□□□□ -0.68
NEDD4L-224ENST00000588712 TRANK1O15050 2925 aa10.77□□□□□ -0.68
NEDD4L-224ENST00000588712 A0A0D9SEW6 157 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 TP73O15350 636 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 ZBTB24O43167 697 aaPredicted RBP10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 CACNG3O60359 315 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 SGSHP51688 502 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 GEMP55040 296 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 SULT2A1Q06520 285 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 ZBTB17Q13105 803 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 ZNF235Q14590 738 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 DNAJC21Q5F1R6 531 aaKnown RBP10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 ALS2CLQ60I27 953 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 ARHGAP36Q6ZRI8 547 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 OTOP3Q7RTS5 596 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 TMC3Q7Z5M5 1100 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 YAF2Q8IY57 180 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 MICALL1Q8N3F8 863 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 DCAF4L2Q8NA75 395 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 NETO2Q8NC67 525 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 DEPDC1BQ8WUY9 529 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 ELSPBP1Q96BH3 223 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 LRRC39Q96DD0 335 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 MSLNLQ96KJ4 702 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 RBM15Q96T37 977 aaKnown RBP eCLIP10.77□□□□□ -0.696e-14■■■■□ 26.6
NEDD4L-224ENST00000588712 NEUROG2Q9H2A3 272 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 GLOD4Q9HC38 313 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 ATP8A1Q9Y2Q0 1164 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 C2orf16Q68DN1 1984 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 HEPACAM2A8MVW5 462 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 J3KR12 359 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 CBX4O00257 560 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 PEX11BO96011 259 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 FAM153BP0C7A2 387 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 LAMP2P13473 410 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 ACVRL1P37023 503 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 PMS2P54278 862 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 GPS2Q13227 327 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 FAM153CQ494X1 144 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 PREPLQ4J6C6 727 aaPredicted RBP10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 RALGPS1Q5JS13 557 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 ARMC3Q5W041 872 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 NAPEPLDQ6IQ20 393 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 TMEM25Q86YD3 366 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 CCNJLQ8IV13 435 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 MFSD6LQ8IWD5 586 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 LRRN4Q8WUT4 740 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 POLR1EQ9GZS1 481 aaKnown RBP10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 SLC25A51Q9H1U9 297 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 LRRC40Q9H9A6 602 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 PDFQ9HBH1 243 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 FAM153AQ9UHL3 310 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 CD207Q9UJ71 328 aa10.77□□□□□ -0.69
NEDD4L-224ENST00000588712 CHD5Q8TDI0 1954 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 CHD7Q9P2D1 2997 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 NEDD8-MDP1E9PL57 170 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 HOXC11O43248 304 aaPredicted RBP10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 TBX10O75333 385 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 SUN1O94901 812 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 AP2A1O95782 977 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 TYRP14679 529 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 TSHRP16473 764 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 PSMB4P28070 264 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 GBP2P32456 591 aaPredicted RBP10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 VIPR2P41587 438 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 NSUN2Q08J23 767 aaKnown RBP eCLIP10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 FCHO2Q0JRZ9 810 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 MPP3Q13368 585 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 CASP8Q14790 479 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 DHCR24Q15392 516 aa10.76□□□□□ -0.69
NEDD4L-224ENST00000588712 SLC14A2Q15849 920 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms