RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 MYO10Q9HD67 2058 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 HELZP42694 1942 aaKnown RBP9.26□□□□□ -0.93
CIRBP-218ENST00000588344 hCG_1818297A0A087WSY0 165 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 FAM86C2PA6NEL3 165 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 HACD1B0YJ81 288 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 SGK1O00141 431 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 DFFAO00273 331 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 DDX3YO15523 660 aaKnown RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 MTSS1O43312 755 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 CST8O60676 142 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 PRAMEF11O60813 436 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 ADAM23O75077 832 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 APBB3O95704 486 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 EPHX1P07099 455 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 C7P10643 843 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 PYGMP11217 842 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 CHRM1P11229 460 aaPredicted RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 HOXB2P14652 356 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 CES1P23141 567 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 HSPA9P38646 679 aaKnown RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 GARSP41250 739 aaKnown RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 IL12RB1P42701 662 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 RECQLP46063 649 aaPredicted RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 ZBTB16Q05516 673 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 RAD51Q06609 339 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 NSUN2Q08J23 767 aaKnown RBP eCLIP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 CCDC15Q0P6D6 951 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 XRCC4Q13426 336 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 CAMK2GQ13555 558 aaPredicted RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 BYSLQ13895 437 aaKnown RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 HNRNPDQ14103 355 aaKnown RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 GAS6Q14393 721 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 GRM3Q14832 879 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 DLG2Q15700 870 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 HNRNPA1L2Q32P51 320 aaKnown RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 ZNF569Q5MCW4 686 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 SEL1L2Q5TEA6 688 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 CCDC181Q5TID7 509 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 Q6ZS52 159 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 BBS12Q6ZW61 710 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 SFTPA1Q8IWL2 248 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 ATPAF2Q8N5M1 289 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 CCDC33Q8N5R6 958 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 PCDH20Q8N6Y1 951 aaKnown RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 FRS2Q8WU20 508 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 SORCS1Q8WY21 1168 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 ALG3Q92685 438 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 HAUS1Q96CS2 278 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 HDAC11Q96DB2 347 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 CELF6Q96J87 481 aaKnown RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 PBKQ96KB5 322 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 RPL10LQ96L21 214 aaKnown RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 LRFN3Q9BTN0 628 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 SP110Q9HB58 689 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 ETNK2Q9NVF9 386 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 CACNA2D2Q9NY47 1150 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 DTLQ9NZJ0 730 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 UBA2Q9UBT2 640 aaPredicted RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 EBF1Q9UH73 591 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 SLCO3A1Q9UIG8 710 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 HCN2Q9UL51 889 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 SCML1Q9UN30 329 aa9.25□□□□□ -0.93
CIRBP-218ENST00000588344 KIF26AQ9ULI4 1882 aaPredicted RBP9.25□□□□□ -0.93
CIRBP-218ENST00000588344 A0A1W2PQF6 199 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 APOC4-APOC2K7ER74 178 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 CES2O00748 559 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 KCNK3O14649 394 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 MCF2LO15068 1137 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 MATN3O15232 486 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 ALOX15BO15296 676 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 GALR2O43603 387 aaPredicted RBP9.24□□□□□ -0.93
CIRBP-218ENST00000588344 SNAP91O60641 907 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 MAFKO60675 156 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 APOC2P02655 101 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 SRCP12931 536 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 KRT10P13645 584 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 PRLRP16471 622 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 CTSOP43234 321 aaPredicted RBP9.24□□□□□ -0.93
CIRBP-218ENST00000588344 MAPK8P45983 427 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 CSNK1DP48730 415 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 GNG11P61952 73 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 SNRPD1P62314 119 aaKnown RBP9.24□□□□□ -0.93
CIRBP-218ENST00000588344 ARF5P84085 180 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 ELAVL3Q14576 367 aaKnown RBP9.24□□□□□ -0.93
CIRBP-218ENST00000588344 C9orf64Q5T6V5 341 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 MARC1Q5VT66 337 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 FAM46CQ5VWP2 391 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 KAZNQ674X7 775 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 NPWQ8N729 165 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 CCNYQ8ND76 341 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 TSTD1Q8NFU3 115 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 OR2T3Q8NH03 318 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 MYO19Q96H55 970 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 LRIG1Q96JA1 1093 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 ACOX2Q99424 681 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 NAP1L3Q99457 506 aaPredicted RBP9.24□□□□□ -0.93
CIRBP-218ENST00000588344 HEMGNQ9BXL5 484 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 PRMT8Q9NR22 394 aaPredicted RBP9.24□□□□□ -0.93
CIRBP-218ENST00000588344 HOMER3Q9NSC5 361 aa9.24□□□□□ -0.93
CIRBP-218ENST00000588344 SEPT3Q9UH03 358 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms