RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 KDM1BQ8NB78 822 aa13.9□□□□□ -0.18
VMP1-203ENST00000586245 RPLP0P6Q8NHW5 317 aa13.9□□□□□ -0.18
VMP1-203ENST00000586245 ACTL9Q8TC94 416 aa13.9□□□□□ -0.18
VMP1-203ENST00000586245 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
VMP1-203ENST00000586245 COG1Q8WTW3 980 aa13.9□□□□□ -0.18
VMP1-203ENST00000586245 CASKIN2Q8WXE0 1202 aa13.9□□□□□ -0.18
VMP1-203ENST00000586245 HDAC11Q96DB2 347 aa13.9□□□□□ -0.18
VMP1-203ENST00000586245 ZNF599Q96NL3 588 aa13.9□□□□□ -0.18
VMP1-203ENST00000586245 OLFM3Q96PB7 478 aa13.9□□□□□ -0.18
VMP1-203ENST00000586245 FRMD8P1Q9BZ68 369 aaPredicted RBP13.9□□□□□ -0.18
VMP1-203ENST00000586245 THAP10Q9P2Z0 257 aaPredicted RBP13.9□□□□□ -0.18
VMP1-203ENST00000586245 UBA2Q9UBT2 640 aaPredicted RBP13.9□□□□□ -0.18
VMP1-203ENST00000586245 HS3ST2Q9Y278 367 aa13.9□□□□□ -0.18
VMP1-203ENST00000586245 F5P12259 2224 aa13.9□□□□□ -0.18
VMP1-203ENST00000586245 HACD1B0YJ81 288 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 ZNF185O15231 689 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 NEBLO76041 1014 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 KLF8O95600 359 aaPredicted RBP13.89□□□□□ -0.19
VMP1-203ENST00000586245 SRCP12931 536 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 CCNCP24863 283 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 NTSR1P30989 418 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 MAGEA9P43362 315 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 SERPINH1P50454 418 aaKnown RBP13.89□□□□□ -0.19
VMP1-203ENST00000586245 VASPP50552 380 aaPredicted RBP13.89□□□□□ -0.19
VMP1-203ENST00000586245 CLCN6P51797 869 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 EIF3EP60228 445 aaKnown RBP13.89□□□□□ -0.19
VMP1-203ENST00000586245 ZNF33AQ06730 810 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 AP1B1Q10567 949 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 XRCC4Q13426 336 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 RFTN1Q14699 578 aaPredicted RBP13.89□□□□□ -0.19
VMP1-203ENST00000586245 PTPRNQ16849 979 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 ACCSLQ4AC99 568 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 TMCO4Q5TGY1 634 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 SERPINA13PQ6UXR4 307 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 ZC3H18Q86VM9 953 aaKnown RBP13.89□□□□□ -0.19
VMP1-203ENST00000586245 CCDC13Q8IYE1 715 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 CCDC105Q8IYK2 499 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 BBS5Q8N3I7 341 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 SH2D3CQ8N5H7 860 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 ACTRT1Q8TDG2 376 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 TFB1MQ8WVM0 346 aaKnown RBP13.89□□□□□ -0.19
VMP1-203ENST00000586245 MS4A14Q96JA4 679 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 MRGPRX3Q96LB0 322 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 TSGA13Q96PP4 275 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 LGMNQ99538 433 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 FERMT1Q9BQL6 677 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 COL25A1Q9BXS0 654 aaPredicted RBP13.89□□□□□ -0.19
VMP1-203ENST00000586245 TTC7AQ9ULT0 858 aaPredicted RBP13.89□□□□□ -0.19
VMP1-203ENST00000586245 STON1Q9Y6Q2 735 aa13.89□□□□□ -0.19
VMP1-203ENST00000586245 ESPNB1AK53 854 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 MATN3O15232 486 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 FANCGO15287 622 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 ATG13O75143 517 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 ZNF189O75820 626 aaPredicted RBP13.88□□□□□ -0.19
VMP1-203ENST00000586245 MT-CO1P00395 513 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 PDGFBP01127 241 aaPredicted RBP13.88□□□□□ -0.19
VMP1-203ENST00000586245 RBP3P10745 1247 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 IL12RB1P42701 662 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 WASP42768 502 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 PAFAH1B1P43034 410 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 RPS9P46781 194 aaKnown RBP13.88□□□□□ -0.19
VMP1-203ENST00000586245 RENBPP51606 427 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 PPIDQ08752 370 aaKnown RBP13.88□□□□□ -0.19
VMP1-203ENST00000586245 LBRQ14739 615 aaKnown RBP13.88□□□□□ -0.19
VMP1-203ENST00000586245 DLG2Q15700 870 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 INO80DQ53TQ3 878 aaPredicted RBP13.88□□□□□ -0.19
VMP1-203ENST00000586245 EOGTQ5NDL2 527 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 CWF19L1Q69YN2 538 aaKnown RBP13.88□□□□□ -0.19
VMP1-203ENST00000586245 DARS2Q6PI48 645 aaKnown RBP13.88□□□□□ -0.19
VMP1-203ENST00000586245 Q6ZS52 159 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 CDKL3Q8IVW4 592 aaPredicted RBP13.88□□□□□ -0.19
VMP1-203ENST00000586245 ALLCQ8N6M5 410 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 IL17RCQ8NAC3 791 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 KIF18AQ8NI77 898 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 FATE1Q969F0 183 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 CLDN23Q96B33 292 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 CAPZA3Q96KX2 299 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 QKIQ96PU8 341 aaKnown RBP eCLIP13.88□□□□□ -0.198e-15■■■■■ 49.6
VMP1-203ENST00000586245 FAM118BQ9BPY3 351 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 CINPQ9BW66 212 aaPredicted RBP13.88□□□□□ -0.19
VMP1-203ENST00000586245 CEP44Q9C0F1 390 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 PDFQ9HBH1 243 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 ZDHHC4Q9NPG8 344 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 HOMER3Q9NSC5 361 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 HAUS2Q9NVX0 235 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 CACNA2D2Q9NY47 1150 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 RNF14Q9UBS8 474 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 SUN2Q9UH99 717 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 SLCO3A1Q9UIG8 710 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 HCN2Q9UL51 889 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 R3HDM2Q9Y2K5 976 aaKnown RBP13.88□□□□□ -0.19
VMP1-203ENST00000586245 ACTL7AQ9Y615 435 aa13.88□□□□□ -0.19
VMP1-203ENST00000586245 CHD5Q8TDI0 1954 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 GOLGA6L10A0A0M3HER8 536 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 ANTXRLA6NF34 631 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 TTC34A8MYJ7 566 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 CHURC1-FNTBB4DL54 471 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 K7ERQ8 282 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 MTSS1O43312 755 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 ATP9BO43861 1147 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms