RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 PSTPIP1O43586 416 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 SIN3BO75182 1162 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 ZNF217O75362 1048 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 ZNF821O75541 412 aaPredicted RBP11.86□□□□□ -0.51
LRFN3-202ENST00000585876 MT-CO1P00395 513 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 CDH6P55285 790 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 CCZ1BP86790 482 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 CCZ1P86791 482 aaPredicted RBP11.86□□□□□ -0.51
LRFN3-202ENST00000585876 BYSLQ13895 437 aaKnown RBP11.86□□□□□ -0.51
LRFN3-202ENST00000585876 USP39Q53GS9 565 aaKnown RBP11.86□□□□□ -0.51
LRFN3-202ENST00000585876 ZNF776Q68DI1 518 aaPredicted RBP11.86□□□□□ -0.51
LRFN3-202ENST00000585876 C22orf39Q6P5X5 142 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 TMPRSS6Q8IU80 811 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 MAP7D3Q8IWC1 876 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 LRRC8AQ8IWT6 810 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 RHOT1Q8IXI2 618 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 PLPP6Q8IY26 295 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 LRRC57Q8N9N7 239 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 SUMF1Q8NBK3 374 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 TPCN2Q8NHX9 752 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 CASKIN2Q8WXE0 1202 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 FAM131CQ96AQ9 280 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 HMCESQ96FZ2 354 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 PDLIM2Q96JY6 352 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 TPSD1Q9BZJ3 242 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 BCCIPQ9P287 314 aaKnown RBP eCLIP11.86□□□□□ -0.51
LRFN3-202ENST00000585876 HPCAL4Q9UM19 191 aa11.86□□□□□ -0.51
LRFN3-202ENST00000585876 TP53BP1Q12888 1972 aaPredicted RBP11.86□□□□□ -0.51
LRFN3-202ENST00000585876 PTPRZ1P23471 2315 aaPredicted RBP11.85□□□□□ -0.51
LRFN3-202ENST00000585876 C3orf70A6NLC5 250 aaPredicted RBP11.85□□□□□ -0.51
LRFN3-202ENST00000585876 MCF2LO15068 1137 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 DAPK3O43293 454 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 SMAD6O43541 496 aaKnown RBP11.85□□□□□ -0.51
LRFN3-202ENST00000585876 CD48P09326 243 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 VAV1P15498 845 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 COMTP21964 271 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 SERPINB6P35237 376 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 SSR1P43307 286 aaKnown RBP11.85□□□□□ -0.51
LRFN3-202ENST00000585876 RPS14P62263 151 aaKnown RBP11.85□□□□□ -0.51
LRFN3-202ENST00000585876 KRT81Q14533 505 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 DLG2Q15700 870 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 TAZQ16635 292 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 ATP13A4Q4VNC1 1196 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 INO80DQ53TQ3 878 aaPredicted RBP11.85□□□□□ -0.51
LRFN3-202ENST00000585876 SPDYCQ5MJ68 293 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 IL31Q6EBC2 164 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 TMCO3Q6UWJ1 677 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 ZNF662Q6ZS27 426 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 USP30Q70CQ3 517 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 KIAA1328Q86T90 577 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 PCDH20Q8N6Y1 951 aaKnown RBP11.85□□□□□ -0.51
LRFN3-202ENST00000585876 ATP11CQ8NB49 1132 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 PRCCQ92733 491 aaPredicted RBP11.85□□□□□ -0.51
LRFN3-202ENST00000585876 NKD2Q969F2 451 aaPredicted RBP11.85□□□□□ -0.51
LRFN3-202ENST00000585876 SIPA1Q96FS4 1042 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 SPACA7Q96KW9 195 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 FAM129BQ96TA1 746 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 PHOX2BQ99453 314 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 DESI2Q9BSY9 194 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 SPON2Q9BUD6 331 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 MTG2Q9H4K7 406 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 ITM2CQ9NQX7 267 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 DDX56Q9NY93 547 aaKnown RBP11.85□□□□□ -0.51
LRFN3-202ENST00000585876 SMG5Q9UPR3 1016 aaKnown RBP11.85□□□□□ -0.51
LRFN3-202ENST00000585876 ADGRG1Q9Y653 693 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 ALG6Q9Y672 507 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 DUSP10Q9Y6W6 482 aa11.85□□□□□ -0.51
LRFN3-202ENST00000585876 IGHV1OR15-9A0A0B4J2B8 117 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 PRR23AA6NEV1 266 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 ARHGAP42A6NI28 874 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 TMEM110-MUSTN1A8MSY1 372 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 C10orf142B7Z368 130 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 K7ERQ8 282 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 SPOPO43791 374 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 PRAMEF11O60813 436 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 ADH1BP00325 375 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 LMNAP02545 664 aaKnown RBP11.84□□□□□ -0.51
LRFN3-202ENST00000585876 KDELR1P24390 212 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 NOP2P46087 812 aaKnown RBP11.84□□□□□ -0.51
LRFN3-202ENST00000585876 NUMBP49757 651 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 TPMTP51580 245 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 KIF5AQ12840 1032 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 SRSF5Q13243 272 aaKnown RBP11.84□□□□□ -0.51
LRFN3-202ENST00000585876 PAFAH1B3Q15102 231 aaKnown RBP11.84□□□□□ -0.51
LRFN3-202ENST00000585876 CST6Q15828 149 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 PLK5Q496M5 336 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 ANKRD20A8PQ5CZ79 823 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 PMS2CLQ68D20 193 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 LAIR1Q6GTX8 287 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 LINGO4Q6UY18 593 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 Q6ZVU0 165 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 DSG4Q86SJ6 1040 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 LRRC49Q8IUZ0 686 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 HOMEZQ8IX15 550 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 KATNAL2Q8IYT4 538 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 KCTD6Q8NC69 237 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 OR2A12Q8NGT7 310 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 PCDH19Q8TAB3 1148 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 OR8D1Q8WZ84 308 aa11.84□□□□□ -0.51
LRFN3-202ENST00000585876 RAPGEF5Q92565 580 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms