RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SPECC1L-ADORA2AF8WAN1 911 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 SGK1O00141 431 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 CREB3O43889 395 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 CACNG3O60359 315 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 OPHN1O60890 802 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 TBL1XO60907 577 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 SEC31AO94979 1220 aaKnown RBP12.93□□□□□ -0.34
VMP1-202ENST00000585847 ERCC2P18074 760 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 OXCT1P55809 520 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 YBEYP58557 167 aaPredicted RBP12.93□□□□□ -0.34
VMP1-202ENST00000585847 DYNLT1P63172 113 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 CDK16Q00536 496 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 PFKPQ01813 784 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 GAD2Q05329 585 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 GALNT2Q10471 571 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 GPS2Q13227 327 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 HLTFQ14527 1009 aaKnown RBP eCLIP12.93□□□□□ -0.34
VMP1-202ENST00000585847 MLF2Q15773 248 aaPredicted RBP12.93□□□□□ -0.34
VMP1-202ENST00000585847 PARP15Q460N3 678 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 MPPE1Q53F39 396 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 ARMC3Q5W041 872 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 HEATR6Q6AI08 1181 aaKnown RBP12.93□□□□□ -0.34
VMP1-202ENST00000585847 FBXO38Q6PIJ6 1188 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 HDXQ7Z353 690 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 NLRP14Q86W24 1093 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 SFTPA1Q8IWL2 248 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 UMODL1-AS1Q8N2C9 162 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 NAT16Q8N8M0 369 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 RTL3Q8N8U3 475 aaKnown RBP12.93□□□□□ -0.34
VMP1-202ENST00000585847 CSGALNACT1Q8TDX6 532 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 AENQ8WTP8 325 aaKnown RBP12.93□□□□□ -0.34
VMP1-202ENST00000585847 ATG4AQ8WYN0 398 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 BHMTQ93088 406 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 FMO2Q99518 471 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 BBS2Q9BXC9 721 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 DTLQ9NZJ0 730 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 MPP6Q9NZW5 540 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 TRHDEQ9UKU6 1024 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 CA14Q9ULX7 337 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 PIAS3Q9Y6X2 628 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 CFAP54Q96N23 3096 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 MYO18AQ92614 2054 aaKnown RBP12.93□□□□□ -0.34
VMP1-202ENST00000585847 C5orf60A6NFR6 353 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 H7C0C1 242 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 AP3B1O00203 1094 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 TULP3O75386 442 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 GCATO75600 419 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 ADH1CP00326 375 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 KRT14P02533 472 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 ADCY8P40145 1251 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 ATP5OP48047 213 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 ADCY2Q08462 1091 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 CBLBQ13191 982 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 PRKD1Q15139 912 aaPredicted RBP12.92□□□□□ -0.34
VMP1-202ENST00000585847 ANO4Q32M45 955 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 FSCBQ5H9T9 825 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 MPP7Q5T2T1 576 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 ITPRIPL1Q6GPH6 555 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 CXorf57Q6NSI4 855 aaKnown RBP12.92□□□□□ -0.34
VMP1-202ENST00000585847 DARS2Q6PI48 645 aaKnown RBP12.92□□□□□ -0.34
VMP1-202ENST00000585847 ZNF783Q6ZMS7 281 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 TPRG1Q6ZUI0 275 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 CHST9Q7L1S5 443 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 KIAA0907Q7Z7F0 614 aaPredicted RBP12.92□□□□□ -0.34
VMP1-202ENST00000585847 CROCCP2Q86T23 111 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 RELL1Q8IUW5 271 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 HJURPQ8NCD3 748 aaPredicted RBP12.92□□□□□ -0.34
VMP1-202ENST00000585847 DDI1Q8WTU0 396 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 ART4Q93070 314 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 TSGA13Q96PP4 275 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 KLC2Q9H0B6 622 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 C8orf33Q9H7E9 229 aaPredicted RBP12.92□□□□□ -0.34
VMP1-202ENST00000585847 NDFIP2Q9NV92 336 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 TMEM248Q9NWD8 314 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 HCN2Q9UL51 889 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 HEY1Q9Y5J3 304 aa12.92□□□□□ -0.34
VMP1-202ENST00000585847 GOLGA6CA6NDK9 693 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 GOLGA6BA6NDN3 693 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 ERI2A8K979 691 aaKnown RBP12.91□□□□□ -0.34
VMP1-202ENST00000585847 EIF3HO15372 352 aaKnown RBP eCLIP12.91□□□□□ -0.34
VMP1-202ENST00000585847 CLDN11O75508 207 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 LUC7L3O95232 432 aaKnown RBP12.91□□□□□ -0.34
VMP1-202ENST00000585847 GOLGA6DP0CG33 693 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 GLULP15104 373 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 PECAM1P16284 738 aaPredicted RBP12.91□□□□□ -0.34
VMP1-202ENST00000585847 CD72P21854 359 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 HLA-FP30511 346 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 MAGEA6P43360 314 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 GALK1P51570 392 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 CLCN6P51797 869 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 STARD6P59095 220 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 FOXK2Q01167 660 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 PPIDQ08752 370 aaKnown RBP12.91□□□□□ -0.34
VMP1-202ENST00000585847 NR1H3Q13133 447 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 MMRN1Q13201 1228 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 FZD5Q13467 585 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 BEND6Q5SZJ8 279 aaPredicted RBP12.91□□□□□ -0.34
VMP1-202ENST00000585847 CFAP58Q5T655 872 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 TMEM215Q68D42 235 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 FSTL4Q6MZW2 842 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms