RNA–Protein interactions for RNA: ENST00000585223.1

DDX5-233, Transcript of DEAD-box helicase 5, human

TSL 2

Gene DDX5, Length 699 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX5-233	ENST00000585223	ATP9B	O43861	1147 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	BNIP3L	O60238	219 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	KRT10	P13645	584 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	ETFB	P38117	255 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	SERPINH1	P50454	418 aa	Known RBP	11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	DGKE	P52429	567 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	NDST2	P52849	883 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	COPA	P53621	1224 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	YBEY	P58557	167 aa	Predicted RBP	11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	DYNLT1	P63172	113 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	GBE1	Q04446	702 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	CAMK2G	Q13555	558 aa	Predicted RBP	11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	DLG2	Q15700	870 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	IFI16	Q16666	785 aa	Known RBP	11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	PARP15	Q460N3	678 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	ACCSL	Q4AC99	568 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	C9orf64	Q5T6V5	341 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	NPNT	Q6UXI9	565 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	PEX26	Q7Z412	305 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	RASSF3	Q86WH2	238 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	KATNAL2	Q8IYT4	538 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	STK40	Q8N2I9	435 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	ATP11C	Q8NB49	1132 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	ALG3	Q92685	438 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	PTPRN2	Q92932	1015 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	RNF157	Q96PX1	679 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	HERPUD2	Q9BSE4	406 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	MKRN2	Q9H000	416 aa	Known RBP	11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	PDF	Q9HBH1	243 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	HS3ST2	Q9Y278	367 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	INVS	Q9Y283	1065 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223		R4GN57	208 aa		11.4	□□□□□ -0.58
DDX5-233	ENST00000585223	NUP205	Q92621	2012 aa		11.4	□□□□□ -0.59
DDX5-233	ENST00000585223	SHROOM3	Q8TF72	1996 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	hCG_1818297	A0A087WSY0	165 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	EDDM13	A0A1B0GTR0	161 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	ARHGAP42	A6NI28	874 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	USP27X	A6NNY8	438 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	RNF103	O00237	685 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	AXIN1	O15169	862 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	DDX3Y	O15523	660 aa	Known RBP	11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	SYNCRIP	O60506	623 aa	Known RBP	11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	PRAMEF11	O60813	436 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	TMCC1	O94876	653 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	CDKN2B	P42772	138 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	METAP1	P53582	386 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	ADCY2	Q08462	1091 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	ZNF211	Q13398	564 aa	Predicted RBP	11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	PAFAH1B3	Q15102	231 aa	Known RBP	11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	TAZ	Q16635	292 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	FAM182A	Q5T1J6	154 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	KAZN	Q674X7	775 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	RETSAT	Q6NUM9	610 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	ZNF662	Q6ZS27	426 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	WDR5B	Q86VZ2	330 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	CCDC50	Q8IVM0	306 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	MAP7D3	Q8IWC1	876 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	REXO1L1P	Q8IX06	675 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	FANCM	Q8IYD8	2048 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	PGBD3	Q8N328	593 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	PLD5	Q8N7P1	536 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	KDM1B	Q8NB78	822 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	CHST14	Q8NCH0	376 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	OR2T3	Q8NH03	318 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	RLN3	Q8WXF3	142 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	NELL1	Q92832	810 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	CALR3	Q96L12	384 aa	Known RBP	11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	TM6SF2	Q9BZW4	377 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	SP110	Q9HB58	689 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	TRMT1	Q9NXH9	659 aa	Known RBP	11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	LHX3	Q9UBR4	397 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	AMFR	Q9UKV5	643 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	HCN4	Q9Y3Q4	1203 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	PCDHA3	Q9Y5H8	950 aa		11.39	□□□□□ -0.59
DDX5-233	ENST00000585223	CCDC66	A2RUB6	948 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	ZNF487	B1APH4	448 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	APOL1	O14791	398 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	ZNF821	O75541	412 aa	Predicted RBP	11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	PECAM1	P16284	738 aa	Predicted RBP	11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	SERPINB6	P35237	376 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	NNMT	P40261	264 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	PSMD8	P48556	350 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	PEX5	P50542	639 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	PTPN5	P54829	565 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	RPS14	P62263	151 aa	Known RBP	11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	SLC10A2	Q12908	348 aa	Predicted RBP	11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	E2F5	Q15329	346 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	ZNF528	Q3MIS6	628 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	ODF2	Q5BJF6	829 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	DCAF12L1	Q5VU92	463 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	SLC9A4	Q6AI14	798 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	LONP2	Q86WA8	852 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	SYCE1	Q8N0S2	351 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	ATPAF2	Q8N5M1	289 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	CAMKK1	Q8N5S9	505 aa		11.38	□□□□□ -0.59
DDX5-233	ENST00000585223	RNF10	Q8N5U6	811 aa	Known RBP	11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms