RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	MBD4	O95243	580 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	METTL18	O95568	372 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	HLA-DQA2	P01906	255 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	CKMT1A	P12532	417 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	PGM1	P36871	562 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	RPS6KA3	P51812	740 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	CLNS1A	P54105	237 aa	Known RBP	4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	TAS2R50	P59544	299 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	KRTAP10-11	P60412	298 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	WDR5	P61964	334 aa	Known RBP	4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	GHRHR	Q02643	423 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	FOXD4	Q12950	439 aa	Predicted RBP	4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ALKBH1	Q13686	389 aa	Known RBP	4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	KCNB1	Q14721	858 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	DLGAP5	Q15398	846 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	SEC23B	Q15437	767 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	BAK1	Q16611	211 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	SLC4A8	Q2Y0W8	1093 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	RUNDC3A	Q59EK9	446 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	WDR45B	Q5MNZ6	344 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	CBWD5	Q5RIA9	395 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	WDR78	Q5VTH9	848 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ZNF813	Q6ZN06	617 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	C4orf50	Q6ZRC1	276 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	MAATS1	Q7Z4T9	603 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	TMTC1	Q8IUR5	882 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	LAS2	Q8IYD9	372 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	TCP11L2	Q8N4U5	519 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	MAFA	Q8NHW3	353 aa	Predicted RBP	4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	HTRA1	Q92743	480 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	EDC3	Q96F86	508 aa	Known RBP	4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	REEP2	Q9BRK0	252 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	C1QTNF7	Q9BXJ2	289 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	PRSS22	Q9GZN4	317 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	PDCL3	Q9H2J4	239 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ABHD16B	Q9H3Z7	469 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	PRDM16	Q9HAZ2	1276 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	VPS45	Q9NRW7	570 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	IRAK4	Q9NWZ3	460 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	TMEM160	Q9NX00	188 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	FBXO2	Q9UK22	296 aa	Predicted RBP	4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	TRPC5	Q9UL62	973 aa	Predicted RBP	4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	DNAJC16	Q9Y2G8	782 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	LAS1L	Q9Y4W2	734 aa	Known RBP	4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	NOS1	P29475	1434 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	PNPLA6	Q8IY17	1366 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	LMTK2	Q8IWU2	1503 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	GCC2	Q8IWJ2	1684 aa		4	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ADAMTS13	Q76LX8	1427 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ERBIN	Q96RT1	1412 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	GOLGA6L10	A0A0M3HER8	536 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	VWA3A	A6NCI4	1184 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	TSPAN4	O14817	238 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	TMEM63A	O94886	807 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ENO1	P06733	434 aa	Known RBP	3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	POLB	P06746	335 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ALAD	P13716	330 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	CHN1	P15882	459 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ATF7	P17544	494 aa	Predicted RBP	3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	CNTF	P26441	200 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	GALNS	P34059	522 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	HOXD12	P35452	270 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	GEMIN4	P57678	1058 aa	Known RBP	3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	G3BP1	Q13283	466 aa	Known RBP eCLIP	3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	CAMK1	Q14012	370 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	DAZAP2	Q15038	168 aa	Predicted RBP	3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	RABEP1	Q15276	862 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	GPR68	Q15743	365 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	PFKFB3	Q16875	520 aa	Predicted RBP	3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754		Q4G0T1	1027 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	TTLL5	Q6EMB2	1281 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	C11orf87	Q6NUJ2	197 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	DCDC5	Q6ZRR9	648 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	MRPL10	Q7Z7H8	261 aa	Known RBP	3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ARMC8	Q8IUR7	673 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	SUGP1	Q8IWZ8	645 aa	Known RBP	3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	FAM47B	Q8NA70	645 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	CSGALNACT1	Q8TDX6	532 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	HVCN1	Q96D96	273 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ZNF845	Q96IR2	970 aa	Predicted RBP	3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	FCRL4	Q96PJ5	515 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	EIF2AK1	Q9BQI3	630 aa	Known RBP	3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ALKBH4	Q9NXW9	302 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	SWAP70	Q9UH65	585 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	COPG1	Q9Y678	874 aa	Known RBP	3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	BRWD3	Q6RI45	1802 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	KIF15	Q9NS87	1388 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	TMEM131L	A2VDJ0	1609 aa		3.99	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ZNF521	Q96K83	1311 aa		3.98	□□□□□ -1.77
PPP4R1-229	ENST00000584754	ATRN	O75882	1429 aa		3.98	□□□□□ -1.77
PPP4R1-229	ENST00000584754	MST1R	Q04912	1400 aa		3.98	□□□□□ -1.77
PPP4R1-229	ENST00000584754	PTPRU	Q92729	1446 aa		3.98	□□□□□ -1.77
PPP4R1-229	ENST00000584754	RIMS2	Q9UQ26	1411 aa		3.98	□□□□□ -1.77
PPP4R1-229	ENST00000584754	CROCC2	H7BZ55	1655 aa		3.98	□□□□□ -1.77
PPP4R1-229	ENST00000584754	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	3.98	□□□□□ -1.77
PPP4R1-229	ENST00000584754		A6NLC8	198 aa		3.98	□□□□□ -1.77
PPP4R1-229	ENST00000584754	CLIC1	O00299	241 aa		3.98	□□□□□ -1.77
PPP4R1-229	ENST00000584754	PRAMEF2	O60811	474 aa		3.98	□□□□□ -1.77
PPP4R1-229	ENST00000584754	BAIAP3	O94812	1187 aa		3.98	□□□□□ -1.77
PPP4R1-229	ENST00000584754	DDX58	O95786	925 aa	Known RBP	3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms