RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 SLFN11Q7Z7L1 901 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 PIP4P1Q86T03 277 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 PSTKQ8IV42 348 aaKnown RBP10.13□□□□□ -0.79
SKA2-208ENST00000583927 AADATQ8N5Z0 425 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 CCDC185Q8N715 623 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 TMIEQ8NEW7 156 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 OR2T34Q8NGX1 318 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 ISG20Q96AZ6 181 aaKnown RBP10.13□□□□□ -0.79
SKA2-208ENST00000583927 BIRC7Q96CA5 298 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 TBC1D31Q96DN5 1066 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 TRIM11Q96F44 468 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 MCEEQ96PE7 176 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 OMDQ99983 421 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 NCAPGQ9BPX3 1015 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 ORAI3Q9BRQ5 295 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 RAB6CQ9H0N0 254 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 DONSONQ9NYP3 566 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 TAS2R14Q9NYV8 317 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 SERGEFQ9UGK8 458 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 EIF2B4Q9UI10 523 aaKnown RBP10.13□□□□□ -0.79
SKA2-208ENST00000583927 CAPN11Q9UMQ6 739 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
SKA2-208ENST00000583927 SNX10Q9Y5X0 201 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 FRYQ5TBA9 3013 aa10.13□□□□□ -0.79
SKA2-208ENST00000583927 PTPRBP23467 1997 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 A0A1W2PP55 124 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 A0A1W2PPC4 97 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 TMEM191CA6NGB0 347 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 ZSCAN5CA6NGD5 496 aaPredicted RBP10.12□□□□□ -0.79
SKA2-208ENST00000583927 C1QTNF3-AMACRE9PGA6 284 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 FAM72CH0Y354 149 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 DDX3XO00571 662 aaKnown RBP eCLIP10.12□□□□□ -0.79
SKA2-208ENST00000583927 LATO43561 262 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 SNAP91O60641 907 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 OPHN1O60890 802 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 ZNF821O75541 412 aaPredicted RBP10.12□□□□□ -0.79
SKA2-208ENST00000583927 KCNK5O95279 499 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 MT-CO1P00395 513 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 IL1BP01584 269 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 FTLP02792 175 aaPredicted RBP10.12□□□□□ -0.79
SKA2-208ENST00000583927 IGHV4-34P06331 123 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 TPM3P06753 285 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 VAV1P15498 845 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 MAOBP27338 520 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 HNRNPH3P31942 346 aaKnown RBP10.12□□□□□ -0.79
SKA2-208ENST00000583927 ZNF135P52742 658 aaPredicted RBP10.12□□□□□ -0.79
SKA2-208ENST00000583927 ATXN3P54252 364 aaPredicted RBP10.12□□□□□ -0.79
SKA2-208ENST00000583927 ADPRHP54922 357 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 RACK1P63244 317 aaKnown RBP10.12□□□□□ -0.79
SKA2-208ENST00000583927 CCDC15Q0P6D6 951 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 HNRNPDQ14103 355 aaKnown RBP10.12□□□□□ -0.79
SKA2-208ENST00000583927 ACCSLQ4AC99 568 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 EFHC2Q5JST6 749 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 FAM72AQ5TYM5 149 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 KIAA0895LQ68EN5 471 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 FAM72DQ6L9T8 149 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 TMC6Q7Z403 805 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 PHLDB2Q86SQ0 1253 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 FAM124AQ86V42 546 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 FAM72BQ86X60 149 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 CACUL1Q86Y37 369 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 DRC7Q8IY82 874 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 HDDC3Q8N4P3 179 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 MINDY1Q8N5J2 469 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 PCDH20Q8N6Y1 951 aaKnown RBP10.12□□□□□ -0.79
SKA2-208ENST00000583927 ATP11CQ8NB49 1132 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 OR2A12Q8NGT7 310 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 NEUROG2Q9H2A3 272 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 MRPL47Q9HD33 250 aaKnown RBP10.12□□□□□ -0.79
SKA2-208ENST00000583927 FZD10Q9ULW2 581 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 SCINQ9Y6U3 715 aa10.12□□□□□ -0.79
SKA2-208ENST00000583927 KNTC1P50748 2209 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 FAM170AA1A519 330 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 FGF10O15520 208 aaPredicted RBP10.11□□□□□ -0.79
SKA2-208ENST00000583927 PLRG1O43660 514 aaKnown RBP10.11□□□□□ -0.79
SKA2-208ENST00000583927 RNASEH2AO75792 299 aaKnown RBP10.11□□□□□ -0.79
SKA2-208ENST00000583927 CER1O95813 267 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 CD160O95971 181 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 PRNPP04156 253 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 SERPING1P05155 500 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 PSMD8P48556 350 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 SERPINH1P50454 418 aaKnown RBP10.11□□□□□ -0.79
SKA2-208ENST00000583927 YBEYP58557 167 aaPredicted RBP10.11□□□□□ -0.79
SKA2-208ENST00000583927 ARF5P84085 180 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 OGDHQ02218 1023 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 GRIK2Q13002 908 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 TEAD4Q15561 434 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 NEK5Q6P3R8 708 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 C22orf39Q6P5X5 142 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 NCEH1Q6PIU2 408 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 DBX2Q6ZNG2 339 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 Q6ZVU0 165 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 VPS36Q86VN1 386 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 TRIM69Q86WT6 500 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 ZCCHC9Q8N567 271 aaKnown RBP10.11□□□□□ -0.79
SKA2-208ENST00000583927 RTL3Q8N8U3 475 aaKnown RBP10.11□□□□□ -0.79
SKA2-208ENST00000583927 OR7D4Q8NG98 312 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 PIP4K2CQ8TBX8 421 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 CASKIN2Q8WXE0 1202 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 ARHGEF2Q92974 986 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms