RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 GLIS1Q8NBF1 620 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 GIPC2Q8TF65 315 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 RNF34Q969K3 372 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 PSMG2Q969U7 264 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 BTN2A3PQ96KV6 586 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 QKIQ96PU8 341 aaKnown RBP eCLIP12.25□□□□□ -0.45
GGA3-217ENST00000583667 FRMD8Q9BZ67 464 aaPredicted RBP12.25□□□□□ -0.45
GGA3-217ENST00000583667 TMPRSS4Q9NRS4 437 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 ETNK2Q9NVF9 386 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 TRPM5Q9NZQ8 1165 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 MARCH2Q9P0N8 246 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 COX16Q9P0S2 106 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 PAK5Q9P286 719 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 PPARGC1AQ9UBK2 798 aaKnown RBP12.25□□□□□ -0.45
GGA3-217ENST00000583667 SFMBT1Q9UHJ3 866 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 SHOC2Q9UQ13 582 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 NEU3Q9UQ49 428 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 FARP1Q9Y4F1 1045 aaPredicted RBP12.25□□□□□ -0.45
GGA3-217ENST00000583667 HEY1Q9Y5J3 304 aa12.25□□□□□ -0.45
GGA3-217ENST00000583667 IGLV3-10A0A075B6K4 115 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 DRGXA6NNA5 263 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 H7C0C1 242 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 PPP1R12AO14974 1030 aaPredicted RBP12.24□□□□□ -0.45
GGA3-217ENST00000583667 MTSS1O43312 755 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 CREB3O43889 395 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 TLR5O60602 858 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 ECI2O75521 394 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 PAPSS2O95340 614 aaPredicted RBP12.24□□□□□ -0.45
GGA3-217ENST00000583667 APOEP02649 317 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 CHRNB1P11230 501 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 PFKLP17858 780 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 SERPINB6P35237 376 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 ATP5C1P36542 298 aaKnown RBP12.24□□□□□ -0.45
GGA3-217ENST00000583667 ATP5OP48047 213 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 ITGA8P53708 1063 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 COG7P83436 770 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 IFRD2Q12894 506 aaPredicted RBP12.24□□□□□ -0.45
GGA3-217ENST00000583667 GPS1Q13098 491 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 GPS2Q13227 327 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 PRKD1Q15139 912 aaPredicted RBP12.24□□□□□ -0.45
GGA3-217ENST00000583667 C5orf22Q49AR2 442 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 PABPC1LQ4VXU2 614 aaKnown RBP12.24□□□□□ -0.45
GGA3-217ENST00000583667 HECTD3Q5T447 861 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 CFAP58Q5T655 872 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 IZUMO3Q5VZ72 239 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 NUGGCQ68CJ6 796 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 TCEAL6Q6IPX3 200 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 KIAA1211LQ6NV74 962 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 TRMT10CQ7L0Y3 403 aaKnown RBP12.24□□□□□ -0.45
GGA3-217ENST00000583667 DNAJB7Q7Z6W7 309 aaPredicted RBP12.24□□□□□ -0.45
GGA3-217ENST00000583667 ZNF683Q8IZ20 524 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 ZCCHC9Q8N567 271 aaKnown RBP12.24□□□□□ -0.45
GGA3-217ENST00000583667 ATP6V0D2Q8N8Y2 350 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 NAT8LQ8N9F0 302 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 FAM71DQ8N9W8 422 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 STKLD1Q8NE28 680 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 TFB1MQ8WVM0 346 aaKnown RBP12.24□□□□□ -0.45
GGA3-217ENST00000583667 FAM3CQ92520 227 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 DNASE1L2Q92874 299 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 TCEAL3Q969E4 200 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 FATE1Q969F0 183 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 DOCK6Q96HP0 2047 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 TSGA13Q96PP4 275 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 FERMT1Q9BQL6 677 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 KLC2Q9H0B6 622 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 PABPC3Q9H361 631 aaKnown RBP12.24□□□□□ -0.45
GGA3-217ENST00000583667 CATSPERBQ9H7T0 1116 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 MED4Q9NPJ6 270 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 DNMT3LQ9UJW3 386 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 KLK13Q9UKR3 277 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 INSL5Q9Y5Q6 135 aa12.24□□□□□ -0.45
GGA3-217ENST00000583667 PRRG1O14668 218 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 EIF3HO15372 352 aaKnown RBP eCLIP12.23□□□□□ -0.45
GGA3-217ENST00000583667 F11P03951 625 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 NUDT17P0C025 328 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 ZSCAN5DPP0CG00 497 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 CSRP1P21291 193 aaKnown RBP12.23□□□□□ -0.45
GGA3-217ENST00000583667 RBL1P28749 1068 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 EPHB2P29323 1055 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 HSD17B3P37058 310 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 TNNT3P45378 269 aaPredicted RBP12.23□□□□□ -0.45
GGA3-217ENST00000583667 GDF10P55107 478 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 DHX9Q08211 1270 aaKnown RBP12.23□□□□□ -0.45
GGA3-217ENST00000583667 GALNT2Q10471 571 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 EFEMP1Q12805 493 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 TRIP13Q15645 432 aaPredicted RBP12.23□□□□□ -0.45
GGA3-217ENST00000583667 C10orf120Q5SQS8 335 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 AFMIDQ63HM1 303 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 KBTBD6Q86V97 674 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 ZC3H18Q86VM9 953 aaKnown RBP12.23□□□□□ -0.45
GGA3-217ENST00000583667 WDR5BQ86VZ2 330 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 NPAS3Q8IXF0 933 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 PPIL6Q8IXY8 311 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 TSEN2Q8NCE0 465 aaKnown RBP12.23□□□□□ -0.45
GGA3-217ENST00000583667 HTR3CQ8WXA8 447 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 HDAC11Q96DB2 347 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 TBC1D31Q96DN5 1066 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 PRMT1Q99873 361 aaKnown RBP12.23□□□□□ -0.45
GGA3-217ENST00000583667 SH3GL2Q99962 352 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 VPS45Q9NRW7 570 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms