RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 SCNM1Q9BWG6 230 aa25.49■■□□□ 1.67
TSEN54-209ENST00000583454 SLC32A1Q9H598 525 aa25.49■■□□□ 1.67
TSEN54-209ENST00000583454 ANAPC7Q9UJX3 599 aa25.49■■□□□ 1.67
TSEN54-209ENST00000583454 FAM208BQ5VWN6 2430 aa25.49■■□□□ 1.67
TSEN54-209ENST00000583454 OPHN1O60890 802 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 LCA5LO95447 670 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 ATXN3P54252 364 aaPredicted RBP25.48■■□□□ 1.67
TSEN54-209ENST00000583454 ERMARDQ5T6L9 678 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 TFAP2DQ7Z6R9 452 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 CCDC170Q8IYT3 715 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 RGL4Q8IZJ4 473 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 KDM1BQ8NB78 822 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 ZNF564Q8TBZ8 553 aaPredicted RBP25.48■■□□□ 1.67
TSEN54-209ENST00000583454 GATA6Q92908 595 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 TBC1D31Q96DN5 1066 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 SIPA1Q96FS4 1042 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 MYO19Q96H55 970 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 BTBD6Q96KE9 485 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 MRGPRX3Q96LB0 322 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 PEBP4Q96S96 227 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 GPR174Q9BXC1 333 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 IMPACTQ9P2X3 320 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 PCSK1NQ9UHG2 260 aa25.48■■□□□ 1.67
TSEN54-209ENST00000583454 ANKRD11Q6UB99 2663 aaPredicted RBP25.48■■□□□ 1.67
TSEN54-209ENST00000583454 CHD5Q8TDI0 1954 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 NYNRINQ9P2P1 1898 aaKnown RBP25.47■■□□□ 1.67
TSEN54-209ENST00000583454 ITPR1Q14643 2758 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 MYO1FO00160 1098 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 PRPSAP2O60256 369 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 SYNCRIPO60506 623 aaKnown RBP25.47■■□□□ 1.67
TSEN54-209ENST00000583454 SRPRAP08240 638 aaKnown RBP25.47■■□□□ 1.67
TSEN54-209ENST00000583454 HLA-EP13747 358 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 RHOQP17081 205 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 OR1E1P30953 314 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 SULT2A1Q06520 285 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 CAMK2GQ13555 558 aaPredicted RBP25.47■■□□□ 1.67
TSEN54-209ENST00000583454 FNDC3BQ53EP0 1204 aaKnown RBP25.47■■□□□ 1.67
TSEN54-209ENST00000583454 SYCP2LQ5T4T6 812 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 C6orf118Q5T5N4 469 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 RNF219Q5W0B1 726 aaPredicted RBP25.47■■□□□ 1.67
TSEN54-209ENST00000583454 SERPINA13PQ6UXR4 307 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 NLRP14Q86W24 1093 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 PSTKQ8IV42 348 aaKnown RBP25.47■■□□□ 1.67
TSEN54-209ENST00000583454 HDDC3Q8N4P3 179 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 CADM4Q8NFZ8 388 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 CTTNBP2NLQ9P2B4 639 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 SUSD2Q9UGT4 822 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 INTUQ9ULD6 942 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 ERVW-1Q9UQF0 538 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 NBEAQ8NFP9 2946 aa25.47■■□□□ 1.67
TSEN54-209ENST00000583454 ILVBLA1L0T0 632 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 EIF3CLB5ME19 914 aaKnown RBP25.46■■□□□ 1.67
TSEN54-209ENST00000583454 EPHX1P07099 455 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 RHOCP08134 193 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 SYPP08247 313 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 CTSOP43234 321 aaPredicted RBP25.46■■□□□ 1.67
TSEN54-209ENST00000583454 VASPP50552 380 aaPredicted RBP25.46■■□□□ 1.67
TSEN54-209ENST00000583454 ECT2LQ008S8 904 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 WDR45BQ5MNZ6 344 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 RWDD4Q6NW29 188 aaKnown RBP25.46■■□□□ 1.67
TSEN54-209ENST00000583454 ZNF783Q6ZMS7 281 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 CACUL1Q86Y37 369 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 TMTC1Q8IUR5 882 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 PRCCQ92733 491 aaPredicted RBP25.46■■□□□ 1.67
TSEN54-209ENST00000583454 EIF3CQ99613 913 aaKnown RBP25.46■■□□□ 1.67
TSEN54-209ENST00000583454 EPAS1Q99814 870 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 SNRNP25Q9BV90 132 aaKnown RBP25.46■■□□□ 1.67
TSEN54-209ENST00000583454 TMEM248Q9NWD8 314 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 GPATCH2LQ9NWQ4 482 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 AP4E1Q9UPM8 1137 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 TMEM131Q92545 1883 aa25.46■■□□□ 1.67
TSEN54-209ENST00000583454 HTR7P34969 479 aa25.45■■□□□ 1.66
TSEN54-209ENST00000583454 SIM1P81133 766 aaPredicted RBP25.45■■□□□ 1.66
TSEN54-209ENST00000583454 GRIK2Q13002 908 aa25.45■■□□□ 1.66
TSEN54-209ENST00000583454 KDF1Q8NAX2 398 aaPredicted RBP25.45■■□□□ 1.66
TSEN54-209ENST00000583454 OR2T3Q8NH03 318 aa25.45■■□□□ 1.66
TSEN54-209ENST00000583454 C1orf216Q8TAB5 229 aa25.45■■□□□ 1.66
TSEN54-209ENST00000583454 VPS28Q9UK41 221 aa25.45■■□□□ 1.66
TSEN54-209ENST00000583454 LAMA5O15230 3695 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 CABIN1Q9Y6J0 2220 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 TP53BP1Q12888 1972 aaPredicted RBP25.44■■□□□ 1.66
TSEN54-209ENST00000583454 METTL12A8MUP2 240 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 HYAL3O43820 417 aaPredicted RBP25.44■■□□□ 1.66
TSEN54-209ENST00000583454 MTA2O94776 668 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 TCF4P15884 667 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 IL1R2P27930 398 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 MAPKAPK2P49137 400 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 ST8SIA6P61647 398 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 BNC1Q01954 994 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 TCEAL1Q15170 157 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 CA9Q16790 459 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 BOLA3Q53S33 107 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 ZCCHC9Q8N567 271 aaKnown RBP25.44■■□□□ 1.66
TSEN54-209ENST00000583454 ZNF366Q8N895 744 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 SLC35G2Q8TBE7 412 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 PSMB7Q99436 277 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 MUC3BQ9H195 1237 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 NDFIP2Q9NV92 336 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 SUN2Q9UH99 717 aa25.44■■□□□ 1.66
TSEN54-209ENST00000583454 LCMT1Q9UIC8 334 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms