RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 HERC2P3Q9BVR0 1158 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 AGXT2Q9BYV1 514 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 PAIP1Q9H074 479 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 ACAD9Q9H845 621 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 BEX4Q9NWD9 120 aaPredicted RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 KLQ9UEF7 1012 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 HSF4Q9ULV5 492 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 OSGIN2Q9Y236 505 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 PKP3Q9Y446 797 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 CYP46A1Q9Y6A2 500 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 FNDC1Q4ZHG4 1894 aaPredicted RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 CYP2D7A0A087X1C5 515 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 CD8B2A6NJW9 211 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 SH2D7A6NKC9 451 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 DSCR3O14972 297 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 SYN3O14994 580 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 CD4P01730 458 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 RFPL3SP0C7P2 107 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 PEPDP12955 493 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 MAN1A1P33908 653 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 PAFAH1B1P43034 410 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 RXRGP48443 463 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 TUBP50607 506 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 NR1H2P55055 460 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 ARHGAP8P85298 464 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 SHC2P98077 582 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 GALNT2Q10471 571 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 SIM2Q14190 667 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 NFIL3Q16649 462 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 WDR78Q5VTH9 848 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 ZNF474Q6S9Z5 364 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 DHRS13Q6UX07 377 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 TMEM200AQ86VY9 491 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 DCP1BQ8IZD4 617 aaKnown RBP4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 PAQR4Q8N4S7 273 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 PNLDC1Q8NA58 520 aaKnown RBP4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 TNIP2Q8NFZ5 429 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 OR52N4Q8NGI2 321 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 RNFT2Q96EX2 444 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 RITA1Q96K30 269 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 NPLQ9BXD5 320 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 INTS2Q9H0H0 1204 aaKnown RBP4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 OSBPL5Q9H0X9 879 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 SMC4Q9NTJ3 1288 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 HCN3Q9P1Z3 774 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 DTX4Q9Y2E6 619 aa4.06□□□□□ -1.76
SMCHD1-209ENST00000583441 A0A087X0M5 115 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 A0A1B0GX30 115 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 SMIM22K7EJ46 135 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 DDX58O95786 925 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 ATP1A3P13637 1013 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 ARSAP15289 507 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 TFEBP19484 476 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 GJC1P36383 396 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 EIF5P55010 431 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 SLC12A2P55011 1212 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 CASP6P55212 293 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 HSF1Q00613 529 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 BYSLQ13895 437 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 TWIST1Q15672 202 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 C10orf76Q5T2E6 689 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 PRAMEF17Q5VTA0 474 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 GFI1BQ5VTD9 330 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 FAM180BQ6P0A1 224 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 GJB7Q6PEY0 223 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 ZNF813Q6ZN06 617 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 C4orf50Q6ZRC1 276 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 C1orf122Q6ZSJ8 110 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 ADGRG6Q86SQ4 1221 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 TMPRSS12Q86WS5 348 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 KLBQ86Z14 1044 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 RHPN2Q8IUC4 686 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 BRSK2Q8IWQ3 736 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 NFKBIDQ8NI38 313 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 ZNF398Q8TD17 642 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 BCAS4Q8TDM0 211 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 TBC1D22AQ8WUA7 517 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 PIGKQ92643 395 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 ZUFSPQ96AP4 578 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 APOPT1Q96IL0 206 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 VCPIP1Q96JH7 1222 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 FCRL5Q96RD9 977 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 CADM1Q9BY67 442 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 PDCL3Q9H2J4 239 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 MROH8Q9H579 483 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 TTC12Q9H892 705 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 VEZTQ9HBM0 779 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 TXNRD2Q9NNW7 524 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 OLA1Q9NTK5 396 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 IPO11Q9UI26 975 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 SLC8A2Q9UPR5 921 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 TNFSF13BQ9Y275 285 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 LMTK3Q96Q04 1460 aa4.05□□□□□ -1.76
SMCHD1-209ENST00000583441 ZNF335Q9H4Z2 1342 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 FAM90A7PA6NKC0 464 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 FAM90A22PA8MWA6 464 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 FAM90A12PA8MX19 464 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 FAM90A23PA8MXZ1 464 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 KCNJ18B7U540 433 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms