RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 MYO1FO00160 1098 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 FGF10O15520 208 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 FOXD2O60548 495 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 RNASEH2AO75792 299 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 ADH1BP00325 375 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 ZNF806P0C7X5 589 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 SLC8A1P32418 973 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 HTR7P34969 479 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 ARF5P84085 180 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 SFSWAPQ12872 951 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 SMTNL2Q2TAL5 461 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 AASDHQ4L235 1098 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 KCNT1Q5JUK3 1230 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 PLA2G2CQ5R387 149 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 SYCP2LQ5T4T6 812 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 TCEAL6Q6IPX3 200 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 CYP4V2Q6ZWL3 525 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 SYT12Q8IV01 421 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 PSTKQ8IV42 348 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 TC2NQ8N9U0 490 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 HSPH1Q92598 858 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 FOXJ1Q92949 421 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 TCEAL3Q969E4 200 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 MRFAP1L1Q96HT8 127 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 EIF3CQ99613 913 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 ACE2Q9BYF1 805 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 BTBD1Q9H0C5 482 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 TNKS2Q9H2K2 1166 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 FBXL12Q9NXK8 326 aa12.88□□□□□ -0.35
SMARCE1-218ENST00000582955 NYNRINQ9P2P1 1898 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 ZNF292O60281 2723 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 WASH4PA8MWX3 477 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 C1QTNF3-AMACRE9PGA6 284 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 KHNYNO15037 678 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 SMAD6O43541 496 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 ZMPSTE24O75844 475 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 SEMA4FO95754 770 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 TMEM253P0C7T8 217 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 C7P10643 843 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 TCF4P15884 667 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 GOT1P17174 413 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 C5AR1P21730 350 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 IL1R2P27930 398 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 ACSL1P33121 698 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 DPP6P42658 865 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 RECQLP46063 649 aaPredicted RBP12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 SERPINH1P50454 418 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 DNA2P51530 1060 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 GEMIN4P57678 1058 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 SLC20A2Q08357 652 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 POM121L1PQ3SYA9 428 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 WDR45BQ5MNZ6 344 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 LEKR1Q6ZMV7 388 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 RFX8Q6ZV50 586 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 USP30Q70CQ3 517 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 HDDC3Q8N4P3 179 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 NIPA2Q8N8Q9 360 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 CADM4Q8NFZ8 388 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 SNX19Q92543 992 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 ZNF419Q96HQ0 510 aaPredicted RBP12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 SGK2Q9HBY8 427 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 TMEM74BQ9NUR3 256 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 DONSONQ9NYP3 566 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 UVRAGQ9P2Y5 699 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 SERGEFQ9UGK8 458 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 PILRBQ9UKJ0 227 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 FCF1Q9Y324 198 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 ACTL7AQ9Y615 435 aa12.87□□□□□ -0.35
SMARCE1-218ENST00000582955 NUP205Q92621 2012 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 CEP192Q8TEP8 1941 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 FAM47DPA6NHR8 397 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 TMEM110-MUSTN1A8MSY1 372 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 PRR5-ARHGAP8B1AHC4 643 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 PATE3B3GLJ2 98 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 RASA4BC9J798 803 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 H3BRJ5 948 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 MCF2LO15068 1137 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 ALOX15BO15296 676 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 RASA4O43374 803 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 BUB1O43683 1085 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 KDELR3O43731 214 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 CFIP05156 583 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 RARAP10276 462 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 MAOBP27338 520 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 GJC1P36383 396 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 ARL4AP40617 200 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 YBEYP58557 167 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 ARHGAP8P85298 464 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 HADHQ16836 314 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 PARP15Q460N3 678 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 BOLA3Q53S33 107 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 DCAF12L1Q5VU92 463 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 FAM46CQ5VWP2 391 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 AADATQ8N5Z0 425 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 PCDH20Q8N6Y1 951 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 OR2A12Q8NGT7 310 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 PIP4K2CQ8TBX8 421 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms