RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 AVILO75366 819 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 KRT37O76014 449 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 KRT38O76015 456 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 TBX18O95935 607 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 POLBP06746 335 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 MBL2P11226 248 aaPredicted RBP9.48□□□□□ -0.89
SS18-220ENST00000582092 EPCAMP16422 314 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 ATF6P18850 670 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 NPY2RP49146 381 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 PGFP49763 221 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 PAPOLAP51003 745 aaKnown RBP9.48□□□□□ -0.89
SS18-220ENST00000582092 GEMP55040 296 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 GAD2Q05329 585 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 WASHC5Q12768 1159 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 TWF1Q12792 350 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 MTM1Q13496 603 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 POLD3Q15054 466 aaPredicted RBP9.48□□□□□ -0.89
SS18-220ENST00000582092 MSS51Q4VC12 460 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 MS4A13Q5J8X5 152 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 TMEM31Q5JXX7 168 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 TFAP2DQ7Z6R9 452 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 CPLX4Q7Z7G2 160 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 TCEAL8Q8IYN2 117 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 RNF168Q8IYW5 571 aaPredicted RBP9.48□□□□□ -0.89
SS18-220ENST00000582092 PPM1NQ8N819 430 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 ANKRD42Q8N9B4 389 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 GSDMBQ8TAX9 411 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 DEPDC1BQ8WUY9 529 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 TEKT5Q96M29 485 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 TSGA13Q96PP4 275 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 XPO6Q96QU8 1125 aaKnown RBP9.48□□□□□ -0.89
SS18-220ENST00000582092 EBNA1BP2Q99848 306 aaKnown RBP9.48□□□□□ -0.89
SS18-220ENST00000582092 VN1R3Q9BXE9 311 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 SLC39A8Q9C0K1 460 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 NSRP1Q9H0G5 558 aaKnown RBP9.48□□□□□ -0.89
SS18-220ENST00000582092 GBA3Q9H227 469 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 S1PR5Q9H228 398 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 TRABDQ9H4I3 376 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 RETREG1Q9H6L5 497 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 ACSS3Q9H6R3 686 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 LRRC40Q9H9A6 602 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 PIDD1Q9HB75 910 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 TRPC7Q9HCX4 862 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 RBM22Q9NW64 420 aaKnown RBP eCLIP9.48□□□□□ -0.89
SS18-220ENST00000582092 MPP6Q9NZW5 540 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 RABGEF1Q9UJ41 708 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 LSM7Q9UK45 103 aaKnown RBP9.48□□□□□ -0.89
SS18-220ENST00000582092 YIPF1Q9Y548 306 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 ASB3Q9Y575 518 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 ACTL7BQ9Y614 415 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 TEX264Q9Y6I9 313 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 MYO16Q9Y6X6 1858 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 C2orf16Q68DN1 1984 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 PATJQ8NI35 1801 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 GMNCA6NCL1 334 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 ZNF840PA6NDX5 716 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 WASH4PA8MWX3 477 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 NDUFAB1O14561 156 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 ACSL4O60488 711 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 RAMP2O60895 175 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 SHOX2O60902 331 aaPredicted RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 SEC24AO95486 1093 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 AP2A1O95782 977 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 EFEMP2O95967 443 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 ZDHHC11BP0C7U3 371 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 IRF1P10914 325 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 NEFHP12036 1026 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 CHN1P15882 459 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 PGAM1P18669 254 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 NFKB1P19838 968 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 TACR2P21452 398 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 OR1E1P30953 314 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 HOXC13P31276 330 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 LSP1P33241 339 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 MAPKAPK2P49137 400 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 SERPINB9P50453 376 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 YBEYP58557 167 aaPredicted RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 GPX6P59796 221 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 PPARDQ03181 441 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 EIF4EBP2Q13542 120 aaPredicted RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 RASA2Q15283 850 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 PARP15Q460N3 678 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 PIK3R6Q5UE93 754 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 MARC1Q5VT66 337 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 TTC39BQ5VTQ0 682 aaPredicted RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 HHATQ5VTY9 493 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 KLHDC10Q6PID8 442 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 MICALCLQ6ZW33 695 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 RTL10Q7L3V2 364 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 OTOP3Q7RTS5 596 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 DNAJB7Q7Z6W7 309 aaPredicted RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 GPR149Q86SP6 731 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 C14orf80Q86SX3 495 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 EXOC3L1Q86VI1 746 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 CAND1Q86VP6 1230 aaKnown RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 LRRC6Q86X45 466 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 RNF135Q8IUD6 432 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.47□□□□□ -0.89
SS18-220ENST00000582092 NPWQ8N729 165 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 GABPB2Q8TAK5 448 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms