RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 METAP1P53582 386 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 POLR2FP61218 127 aaKnown RBP21.43■■□□□ 1.02
CCDC42-203ENST00000581598 FMO1Q01740 532 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 AGBL4Q5VU57 503 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 TRIM72Q6ZMU5 477 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 Q6ZVU0 165 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 TRIM69Q86WT6 500 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 SLC20A1Q8WUM9 679 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 CCDC114Q96M63 670 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 CFAP57Q96MR6 1250 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 ELF4Q99607 663 aaPredicted RBP21.43■■□□□ 1.02
CCDC42-203ENST00000581598 PPARGC1AQ9UBK2 798 aaKnown RBP21.43■■□□□ 1.02
CCDC42-203ENST00000581598 ZNF212Q9UDV6 495 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 DMTF1Q9Y222 760 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 SNX10Q9Y5X0 201 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 ZZEF1O43149 2961 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 CHD5Q8TDI0 1954 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 AKAP13Q12802 2813 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 TBC1D3DA0A087WVF3 549 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 TBC1D3IA0A087WXS9 549 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 TBC1D3EA0A087X179 549 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 TBC1D3KA0A087X1G2 549 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 ILVBLA1L0T0 632 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 TBC1D3FA6NER0 549 aaPredicted RBP21.42■■□□□ 1.02
CCDC42-203ENST00000581598 TBC1D3LB9A6J9 549 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 KCNK3O14649 394 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 YKT6O15498 198 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 MT-CO1P00395 513 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 SERPINC1P01008 464 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 TBC1D3HP0C7X1 549 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 CHRNB2P17787 502 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 KLK7P49862 253 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 PPP2CBP62714 309 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 PPP2CAP67775 309 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 INAVAQ3KP66 663 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 SLC45A4Q5BKX6 768 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 TBC1D3GQ6DHY5 549 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 TBC1D3CQ6IPX1 549 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 NAPEPLDQ6IQ20 393 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 PRPF39Q86UA1 669 aaKnown RBP21.42■■□□□ 1.02
CCDC42-203ENST00000581598 TBC1D3Q8IZP1 549 aaPredicted RBP21.42■■□□□ 1.02
CCDC42-203ENST00000581598 PNPLA1Q8N8W4 532 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 SERAC1Q96JX3 654 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 NAP1L5Q96NT1 182 aaPredicted RBP21.42■■□□□ 1.02
CCDC42-203ENST00000581598 RETREG1Q9H6L5 497 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 RTN4Q9NQC3 1192 aaKnown RBP21.42■■□□□ 1.02
CCDC42-203ENST00000581598 AASDHPPTQ9NRN7 309 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 METTL5Q9NRN9 209 aaKnown RBP21.42■■□□□ 1.02
CCDC42-203ENST00000581598 TMPRSS4Q9NRS4 437 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 FAM207AQ9NSI2 230 aaPredicted RBP21.42■■□□□ 1.02
CCDC42-203ENST00000581598 MPP6Q9NZW5 540 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 ARHGAP20Q9P2F6 1191 aa21.42■■□□□ 1.02
CCDC42-203ENST00000581598 FARP1Q9Y4F1 1045 aaPredicted RBP21.42■■□□□ 1.02
CCDC42-203ENST00000581598 DOCK9Q9BZ29 2069 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 SPEGQ15772 3267 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 A0A0D9SEW6 157 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 CXorf51AA0A1B0GTR3 108 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 EPHB6O15197 1021 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 TNFSF14O43557 240 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 SNAP91O60641 907 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 RTN2O75298 545 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 OR1E1P30953 314 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 STAT1P42224 750 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 GSCP56915 257 aaPredicted RBP21.41■■□□□ 1.02
CCDC42-203ENST00000581598 UBASH3AP57075 661 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 NRG1Q02297 640 aaPredicted RBP21.41■■□□□ 1.02
CCDC42-203ENST00000581598 CNTN1Q12860 1018 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 CCNI2Q6ZMN8 369 aaPredicted RBP21.41■■□□□ 1.02
CCDC42-203ENST00000581598 IQCHQ86VS3 1027 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 MFSD2AQ8NA29 543 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 ATP11CQ8NB49 1132 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 TMIEQ8NEW7 156 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 OR2A12Q8NGT7 310 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 ZCCHC14Q8WYQ9 949 aaKnown RBP21.41■■□□□ 1.02
CCDC42-203ENST00000581598 ZYG11BQ9C0D3 744 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 ERVMER34-1Q9H9K5 563 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 PREBQ9HCU5 417 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 IFNKQ9P0W0 207 aa21.41■■□□□ 1.02
CCDC42-203ENST00000581598 WNT9AO14904 365 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 CAPNS1P04632 268 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 CTSLP07711 333 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 ATXN1LP0C7T5 689 aaKnown RBP21.4■■□□□ 1.02
CCDC42-203ENST00000581598 UNGP13051 313 aaPredicted RBP21.4■■□□□ 1.02
CCDC42-203ENST00000581598 CHRNA3P32297 505 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 SLC20A2Q08357 652 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 CCDC15Q0P6D6 951 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 OVGP1Q12889 678 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 NR1I3Q14994 352 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 FILIP1LQ4L180 1135 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 TFAP2DQ7Z6R9 452 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 FAM131BQ86XD5 332 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 OXR1Q8N573 874 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 XPO4Q9C0E2 1151 aaKnown RBP21.4■■□□□ 1.02
CCDC42-203ENST00000581598 NLRC4Q9NPP4 1024 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 GDF3Q9NR23 364 aa21.4■■□□□ 1.02
CCDC42-203ENST00000581598 C2CD4BA6NLJ0 364 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 TLR4O00206 839 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 PLK4O00444 970 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 CBFA2T2O43439 604 aa21.39■■□□□ 1.01
CCDC42-203ENST00000581598 ZMPSTE24O75844 475 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms