RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PRRT4C9JH25 899 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 K7EQS6 105 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 ATP9BO43861 1147 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 CEP104O60308 925 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 MAFKO60675 156 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 FGGP02679 453 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 CXCR5P32302 372 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 KIR2DL1P43626 348 aaPredicted RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 RPS9P46781 194 aaKnown RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 SLC6A11P48066 632 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 PAPOLAP51003 745 aaKnown RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 DNA2P51530 1060 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 ECT2LQ008S8 904 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 MESP2Q0VG99 397 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 SLC10A2Q12908 348 aaPredicted RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 HNRNPDQ14103 355 aaKnown RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 PRKD1Q15139 912 aaPredicted RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 PON2Q15165 354 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 SIX1Q15475 284 aaPredicted RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 CCNG2Q16589 344 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 CYP1B1Q16678 543 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 IL31Q6EBC2 164 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 FSTL4Q6MZW2 842 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 AADACL2Q6P093 401 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 CREG2Q8IUH2 290 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 APCDD1Q8J025 514 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 SIX5Q8N196 739 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 ATPAF2Q8N5M1 289 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 OR7D4Q8NG98 312 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 KIF18AQ8NI77 898 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 TTC8Q8TAM2 541 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 SLC35B2Q8TB61 432 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 ACTL9Q8TC94 416 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 COG1Q8WTW3 980 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 MAML1Q92585 1016 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 NKD2Q969F2 451 aaPredicted RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 ISG20Q96AZ6 181 aaKnown RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 HAUS1Q96CS2 278 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 NECAB3Q96P71 396 aaPredicted RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 VAT1Q99536 393 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 HEMGNQ9BXL5 484 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 CEP44Q9C0F1 390 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 HAUS2Q9NVX0 235 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 THAP10Q9P2Z0 257 aaPredicted RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 IPO11Q9UI26 975 aaKnown RBP10.62□□□□□ -0.71
CCDC47-203ENST00000580986 VPS51Q9UID3 782 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 RABGEF1Q9UJ41 708 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 SLC25A13Q9UJS0 675 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 MFHAS1Q9Y4C4 1052 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 NUP205Q92621 2012 aa10.62□□□□□ -0.71
CCDC47-203ENST00000580986 BDP1A6H8Y1 2624 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 BCLAF3A2AJT9 711 aaKnown RBP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 CFAP69A5D8W1 941 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 CHURC1-FNTBB4DL54 471 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 MCF2LO15068 1137 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 TRIM24O15164 1050 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 MATN3O15232 486 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 PEX11BO96011 259 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 CHRNB1P11230 501 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 PECAM1P16284 738 aaPredicted RBP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 ACVRL1P37023 503 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 HSPA9P38646 679 aaKnown RBP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 NNMTP40261 264 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 SERPINH1P50454 418 aaKnown RBP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 DYNLT1P63172 113 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 ARF5P84085 180 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 OTUD4Q01804 1114 aaKnown RBP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 KDSRQ06136 332 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 SLC45A4Q5BKX6 768 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 CCDC181Q5TID7 509 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 TRIM67Q6ZTA4 783 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 ZNF572Q7Z3I7 529 aaPredicted RBP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 BMP8AQ7Z5Y6 402 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 SH2D3CQ8N5H7 860 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 TEX26Q8N6G2 289 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 C12orf50Q8NA57 414 aaPredicted RBP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 ANKK1Q8NFD2 765 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 PJA1Q8NG27 643 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 TFB1MQ8WVM0 346 aaKnown RBP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 EZH1Q92800 747 aaPredicted RBP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 CLDN23Q96B33 292 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 MYO19Q96H55 970 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 CELF6Q96J87 481 aaKnown RBP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 QKIQ96PU8 341 aaKnown RBP eCLIP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 FERMT1Q9BQL6 677 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 TMEM245Q9H330 911 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 FBRSQ9HAH7 460 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 FBRSL1Q9HCM7 1045 aaKnown RBP10.61□□□□□ -0.71
CCDC47-203ENST00000580986 CA14Q9ULX7 337 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 PLA2G4CQ9UP65 541 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 SLC8A2Q9UPR5 921 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 PCDHGA10Q9Y5H3 936 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 HEY1Q9Y5J3 304 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 A0A0C4DFX4 3053 aa10.61□□□□□ -0.71
CCDC47-203ENST00000580986 GOLGA6L10A0A0M3HER8 536 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 CBX4O00257 560 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 DFFAO00273 331 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 CD160O95971 181 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 EGFP01133 1207 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 ITGAVP06756 1048 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms