RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 SH2D3CQ8N5H7 860 aa19.62■□□□□ 0.73
NDEL1-209ENST00000580738 ATP6V0D2Q8N8Y2 350 aa19.62■□□□□ 0.73
NDEL1-209ENST00000580738 IFT43Q96FT9 208 aa19.62■□□□□ 0.73
NDEL1-209ENST00000580738 DUSP23Q9BVJ7 150 aa19.62■□□□□ 0.73
NDEL1-209ENST00000580738 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.62■□□□□ 0.73
NDEL1-209ENST00000580738 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.61■□□□□ 0.73
NDEL1-209ENST00000580738 CDRT15L2A8MXV6 281 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 CASC3O15234 703 aaKnown RBP19.61■□□□□ 0.73
NDEL1-209ENST00000580738 PMS1P54277 932 aaKnown RBP19.61■□□□□ 0.73
NDEL1-209ENST00000580738 OXCT1P55809 520 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 HNRNPKP61978 463 aaKnown RBP eCLIP19.61■□□□□ 0.73
NDEL1-209ENST00000580738 ZNF177Q13360 481 aaPredicted RBP19.61■□□□□ 0.73
NDEL1-209ENST00000580738 TAF5Q15542 800 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 RABGAP1LQ5R372 815 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 TTC39BQ5VTQ0 682 aaPredicted RBP19.61■□□□□ 0.73
NDEL1-209ENST00000580738 DENND1BQ6P3S1 775 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 CRTC1Q6UUV9 634 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 PPM1KQ8N3J5 372 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 EXD3Q8N9H8 876 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 ZNF548Q8NEK5 533 aaPredicted RBP19.61■□□□□ 0.73
NDEL1-209ENST00000580738 BMFQ96LC9 184 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 RPRD1AQ96P16 312 aaPredicted RBP19.61■□□□□ 0.73
NDEL1-209ENST00000580738 NT5C1BQ96P26 610 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 TRIM4Q9C037 500 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 POPDC2Q9HBU9 364 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 VPS28Q9UK41 221 aa19.61■□□□□ 0.73
NDEL1-209ENST00000580738 UBR5O95071 2799 aaPredicted RBP19.61■□□□□ 0.73
NDEL1-209ENST00000580738 FAM237AA0A1B0GTK4 181 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 K7ERQ8 282 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 PCDH8O95206 1070 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 SRCP12931 536 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 CHRNA3P32297 505 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 PRCPP42785 496 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 CSRP3P50461 194 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 YWHAZP63104 245 aaKnown RBP19.6■□□□□ 0.73
NDEL1-209ENST00000580738 NFATC3Q12968 1075 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 CLN3Q13286 438 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 FZD2Q14332 565 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 ANKRD40Q6AI12 368 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 ZCCHC8Q6NZY4 707 aaKnown RBP19.6■□□□□ 0.73
NDEL1-209ENST00000580738 RRAGAQ7L523 313 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 EFL1Q7Z2Z2 1120 aaKnown RBP19.6■□□□□ 0.73
NDEL1-209ENST00000580738 PTAR1Q7Z6K3 402 aaPredicted RBP19.6■□□□□ 0.73
NDEL1-209ENST00000580738 OR2A12Q8NGT7 310 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 CCDC97Q96F63 343 aaPredicted RBP19.6■□□□□ 0.73
NDEL1-209ENST00000580738 GPR27Q9NS67 375 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 EVA1BQ9NVM1 165 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 ARMCX3Q9UH62 379 aaPredicted RBP19.6■□□□□ 0.73
NDEL1-209ENST00000580738 SLC12A6Q9UHW9 1150 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 KLF15Q9UIH9 416 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 PCDHGA8Q9Y5G5 932 aa19.6■□□□□ 0.73
NDEL1-209ENST00000580738 COL27A1Q8IZC6 1860 aaPredicted RBP19.6■□□□□ 0.73
NDEL1-209ENST00000580738 SYNJ2BP-COX16A0A087WUM0 186 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 POM121BA6NF01 834 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 A6NNZ2 444 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 EFSO43281 561 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 CSF2P04141 144 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 GGCXP38435 758 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 ACADSBP45954 432 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 FMO5P49326 533 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 FKBP3Q00688 224 aaKnown RBP19.59■□□□□ 0.73
NDEL1-209ENST00000580738 AUHQ13825 339 aaKnown RBP19.59■□□□□ 0.73
NDEL1-209ENST00000580738 FGL2Q14314 439 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 DRAP1Q14919 205 aaPredicted RBP19.59■□□□□ 0.73
NDEL1-209ENST00000580738 ZSCAN23Q3MJ62 389 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 ARL13BQ3SXY8 428 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 TMEM259Q4ZIN3 620 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 CHST14Q8NCH0 376 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 SPATA32Q96LK8 384 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 PPP1R9BQ96SB3 815 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 TRIM62Q9BVG3 475 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 SLC4A5Q9BY07 1137 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 COX16Q9P0S2 106 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 IL17BQ9UHF5 180 aa19.59■□□□□ 0.73
NDEL1-209ENST00000580738 E5RJQ4 531 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 RAD51BO15315 384 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 SNAP91O60641 907 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 TNFSF15O95150 251 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 NME1P15531 152 aaKnown RBP19.58■□□□□ 0.72
NDEL1-209ENST00000580738 DEFB133Q30KQ1 61 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 PERM1Q5SV97 790 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 RBM44Q6ZP01 1051 aaKnown RBP19.58■□□□□ 0.72
NDEL1-209ENST00000580738 ARHGEF19Q8IW93 802 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 TMIEQ8NEW7 156 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 LMO3Q8TAP4 145 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 RNF34Q969K3 372 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 GRAMD1AQ96CP6 724 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 GOLPH3LQ9H4A5 285 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 FAM204AQ9H8W3 233 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 DDIT4Q9NX09 232 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 VANGL2Q9ULK5 521 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 HS3ST2Q9Y278 367 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 FARP1Q9Y4F1 1045 aaPredicted RBP19.58■□□□□ 0.72
NDEL1-209ENST00000580738 HS3ST3A1Q9Y663 406 aa19.58■□□□□ 0.72
NDEL1-209ENST00000580738 SPTY2D1-AS1A0A0U1RR47 76 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 EME2A4GXA9 379 aaPredicted RBP19.57■□□□□ 0.72
NDEL1-209ENST00000580738 SMAD6O43541 496 aaKnown RBP19.57■□□□□ 0.72
NDEL1-209ENST00000580738 PAK4O96013 591 aaPredicted RBP19.57■□□□□ 0.72
NDEL1-209ENST00000580738 RRM1P23921 792 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 CCR1P32246 355 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms