RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 IMPACTQ9P2X3 320 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 NEU3Q9UQ49 428 aa16.78■□□□□ 0.28
IFT20-210ENST00000580357 C1QTNF3-AMACRE9PGA6 284 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 H3BRJ5 948 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 PROSCO94903 275 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 MT-CO1P00395 513 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 TGM1P22735 817 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 MPLP40238 635 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 LMNB2Q03252 620 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 SPA17Q15506 151 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 DPYSL2Q16555 572 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 INO80DQ53TQ3 878 aaPredicted RBP16.77■□□□□ 0.28
IFT20-210ENST00000580357 RFX8Q6ZV50 586 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 TMTC1Q8IUR5 882 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 MMAAQ8IVH4 418 aaKnown RBP16.77■□□□□ 0.28
IFT20-210ENST00000580357 PCDH20Q8N6Y1 951 aaKnown RBP16.77■□□□□ 0.28
IFT20-210ENST00000580357 TMIEQ8NEW7 156 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 SLC35G2Q8TBE7 412 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 PEBP4Q96S96 227 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 OMDQ99983 421 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 SPTLC3Q9NUV7 552 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 NDFIP2Q9NV92 336 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 FBXL12Q9NXK8 326 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 FZD4Q9ULV1 537 aa16.77■□□□□ 0.28
IFT20-210ENST00000580357 TPX2Q9ULW0 747 aaKnown RBP16.77■□□□□ 0.28
IFT20-210ENST00000580357 PLXND1Q9Y4D7 1925 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 MYO15AQ9UKN7 3530 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 SPAG17Q6Q759 2223 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 ARHGAP42A6NI28 874 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 METTL12A8MUP2 240 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 LCA5LO95447 670 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 IL1BP01584 269 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 PRNPP04156 253 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 RARAP10276 462 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 GOT1P17174 413 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 CDC25BP30305 580 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 MAN1A1P33908 653 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 ACVRL1P37023 503 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 SSR1P43307 286 aaKnown RBP16.76■□□□□ 0.27
IFT20-210ENST00000580357 SERPINH1P50454 418 aaKnown RBP16.76■□□□□ 0.27
IFT20-210ENST00000580357 SERINC3Q13530 473 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 TCEAL1Q15170 157 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 PPP6R3Q5H9R7 873 aaPredicted RBP16.76■□□□□ 0.27
IFT20-210ENST00000580357 CYP4V2Q6ZWL3 525 aaPredicted RBP16.76■□□□□ 0.27
IFT20-210ENST00000580357 ZNF354CQ86Y25 554 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 MAP7D3Q8IWC1 876 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 C12orf50Q8NA57 414 aaPredicted RBP16.76■□□□□ 0.27
IFT20-210ENST00000580357 PIGKQ92643 395 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 BTBD6Q96KE9 485 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 KCTD15Q96SI1 283 aaPredicted RBP16.76■□□□□ 0.27
IFT20-210ENST00000580357 GPR174Q9BXC1 333 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 PACSIN1Q9BY11 444 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 KDM4CQ9H3R0 1056 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 GPATCH2LQ9NWQ4 482 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 RCOR3Q9P2K3 495 aaPredicted RBP16.76■□□□□ 0.27
IFT20-210ENST00000580357 SUSD2Q9UGT4 822 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 PPM1HQ9ULR3 514 aa16.76■□□□□ 0.27
IFT20-210ENST00000580357 THADAQ6YHU6 1953 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 ABCA7Q8IZY2 2146 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 GOLGA6L6A8MZA4 724 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 RASA4BC9J798 803 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 KHNYNO15037 678 aaKnown RBP16.75■□□□□ 0.27
IFT20-210ENST00000580357 MID1O15344 667 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 RASA4O43374 803 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 BUB1O43683 1085 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 MTA2O94776 668 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 KRT7P08729 469 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 GNSP15586 552 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 ERCC2P18074 760 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 IL1R2P27930 398 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 CHRNA3P32297 505 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 MAGEA1P43355 309 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 NUMBP49757 651 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 CA9Q16790 459 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 DUOXA1Q1HG43 343 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 CARD16Q5EG05 197 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 LINGO4Q6UY18 593 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 PRR23CQ6ZRP0 262 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 Q6ZVU0 165 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 OR2A12Q8NGT7 310 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 HSPH1Q92598 858 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 CALR3Q96L12 384 aaKnown RBP16.75■□□□□ 0.27
IFT20-210ENST00000580357 CWC15Q9P013 229 aaKnown RBP16.75■□□□□ 0.27
IFT20-210ENST00000580357 PILRBQ9UKJ0 227 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 GVINP1Q7Z2Y8 2422 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 VPS13AQ96RL7 3174 aa16.75■□□□□ 0.27
IFT20-210ENST00000580357 MUC22E2RYF6 1773 aaPredicted RBP16.74■□□□□ 0.27
IFT20-210ENST00000580357 LRRC72A6NJI9 287 aa16.74■□□□□ 0.27
IFT20-210ENST00000580357 K7ERQ8 282 aa16.74■□□□□ 0.27
IFT20-210ENST00000580357 SLC7A4O43246 635 aa16.74■□□□□ 0.27
IFT20-210ENST00000580357 SMAD6O43541 496 aaKnown RBP16.74■□□□□ 0.27
IFT20-210ENST00000580357 IPO7O95373 1038 aaKnown RBP16.74■□□□□ 0.27
IFT20-210ENST00000580357 SEMA4FO95754 770 aa16.74■□□□□ 0.27
IFT20-210ENST00000580357 VAV1P15498 845 aa16.74■□□□□ 0.27
IFT20-210ENST00000580357 GLDCP23378 1020 aa16.74■□□□□ 0.27
IFT20-210ENST00000580357 SLC1A1P43005 524 aa16.74■□□□□ 0.27
IFT20-210ENST00000580357 PTGER3P43115 390 aa16.74■□□□□ 0.27
IFT20-210ENST00000580357 SNRPD1P62314 119 aaKnown RBP16.74■□□□□ 0.27
IFT20-210ENST00000580357 ARF5P84085 180 aa16.74■□□□□ 0.27
IFT20-210ENST00000580357 SLC25A11Q02978 314 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms