RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 LRRC74AQ0VAA2 488 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 DLG2Q15700 870 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 UTS2BQ765I0 119 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 LRRC8DQ7L1W4 858 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 MFSD3Q96ES6 412 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 HERPUD2Q9BSE4 406 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 BDH2Q9BUT1 245 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 C9orf16Q9BUW7 83 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 GPR63Q9BZJ6 419 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 SDCBP2Q9H190 292 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 POPDC2Q9HBU9 364 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 PLA2G6O60733 806 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 RPS6KA3P51812 740 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 VAC14Q08AM6 782 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 MGAT5BQ3V5L5 792 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 TAGAPQ8N103 731 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 CLEC4DQ8WXI8 215 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 PPP1R2P1Q96PQ5 205 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 MTG1Q9BT17 334 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 MUC3BQ9H195 1237 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 PCDHGB4Q9UN71 923 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 FAM50BQ9Y247 325 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 TOPAZ1Q8N9V7 1692 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 TNPO2O14787 897 aaKnown RBP13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 LINGO3P0C6S8 592 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 FCGR1AP12314 374 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 DDX39BQ13838 428 aaKnown RBP13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 ARL13AQ5H913 290 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 PMF1Q6P1K2 205 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 AMIGO3Q86WK7 504 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 KBTBD2Q8IY47 623 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 CHRAC1Q9NRG0 131 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 PRPF19Q9UMS4 504 aaKnown RBP13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 IRF1P10914 325 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 NOS2P35228 1153 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 TUBP50607 506 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 PRKAA2P54646 552 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 FKBP1AP62942 108 aaKnown RBP13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 EFEMP1Q12805 493 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 DGCR6Q14129 220 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 GRIK4Q16099 956 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 HSDL1Q3SXM5 330 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 MARC1Q5VT66 337 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 CENPLQ8N0S6 344 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 C1orf127Q8N9H9 656 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 PLEKHG4BQ96PX9 1271 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 PANX3Q96QZ0 392 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 TBCDQ9BTW9 1192 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 SPATA16Q9BXB7 569 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 ROGDIQ9GZN7 287 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 RNF181Q9P0P0 153 aa13.79□□□□□ -0.2
TRAPPC8-207ENST00000580104 C9JVG2 144 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 TK2O00142 265 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 METTL18O95568 372 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 PCNAP12004 261 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 CYP2B6P20813 491 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 CA9Q16790 459 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 SLC39A4Q6P5W5 647 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 SLC27A1Q6PCB7 646 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 EFL1Q7Z2Z2 1120 aaKnown RBP13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 FBXO39Q8N4B4 442 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 GPRC5AQ8NFJ5 357 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 DNAJB3Q8WWF6 145 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 RERGLQ9H628 205 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 WWOXQ9NZC7 414 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 LIMD1Q9UGP4 676 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 BTRCQ9Y297 605 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 RRN3P2A6NIE6 340 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 MFSD11O43934 449 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 FBXO21O94952 628 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 GPR162Q16538 588 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 PERM1Q5SV97 790 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 TIGD7Q6NT04 549 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 FAM126BQ8IXS8 530 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 ZCCHC7Q8N3Z6 543 aaKnown RBP13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 PCDH19Q8TAB3 1148 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 FNIP1Q8TF40 1166 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 DDX1Q92499 740 aaKnown RBP13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 ACOX2Q99424 681 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 FAM149AA5PLN7 773 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 CCDC154A6NI56 674 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 EVPLLA8MZ36 301 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 TMEM114B3SHH9 223 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 RGS5O15539 181 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 SYNCRIPO60506 623 aaKnown RBP13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 AMHP03971 560 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 TFEBP19484 476 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 MMP14P50281 582 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 OAZ1P54368 228 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 LSM3P62310 102 aaKnown RBP13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 SCARA3Q6AZY7 606 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 SIAH1Q8IUQ4 282 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 PARP8Q8N3A8 854 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 SLC4A11Q8NBS3 891 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 GIPC3Q8TF64 312 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 PRR11Q96HE9 360 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 ZNF512Q96ME7 567 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 TXLNGYQ9BZA5 131 aa13.78□□□□□ -0.2
TRAPPC8-207ENST00000580104 DMTF1Q9Y222 760 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms