RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 IQCHQ86VS3 1027 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 FAM131BQ86XD5 332 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 ATP11CQ8NB49 1132 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 TMIEQ8NEW7 156 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 NEK11Q8NG66 645 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 SERAC1Q96JX3 654 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 ELF4Q99607 663 aaPredicted RBP11.82□□□□□ -0.52
SSH2-208ENST00000579040 ZYG11BQ9C0D3 744 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 PREBQ9HCU5 417 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 NLRC4Q9NPP4 1024 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 GDF3Q9NR23 364 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 METTL5Q9NRN9 209 aaKnown RBP11.82□□□□□ -0.52
SSH2-208ENST00000579040 MPP6Q9NZW5 540 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 PPARGC1AQ9UBK2 798 aaKnown RBP11.82□□□□□ -0.52
SSH2-208ENST00000579040 ZNF212Q9UDV6 495 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 LIMA1Q9UHB6 759 aaKnown RBP11.82□□□□□ -0.52
SSH2-208ENST00000579040 SARDHQ9UL12 918 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 ZMIZ1Q9ULJ6 1067 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 BTBD3Q9Y2F9 522 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 SNX10Q9Y5X0 201 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 ACACAQ13085 2346 aa11.82□□□□□ -0.52
SSH2-208ENST00000579040 CHD6Q8TD26 2715 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 A0A0D9SEW6 157 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 LRRC10BA6NIK2 292 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 EPHB6O15197 1021 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 TNFSF14O43557 240 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 MAGEC1O60732 1142 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 SRGAP2O75044 1071 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 RTN2O75298 545 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 DKK1O94907 266 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 MBD3O95983 291 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 MT-CO1P00395 513 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 PRNPP04156 253 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 WNT1P04628 370 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 SDC4P31431 198 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 CHRNA3P32297 505 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 ETFBP38117 255 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 NSFP46459 744 aaKnown RBP11.81□□□□□ -0.52
SSH2-208ENST00000579040 ARRB1P49407 418 aaPredicted RBP11.81□□□□□ -0.52
SSH2-208ENST00000579040 METAP1P53582 386 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 ATP11AP98196 1134 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 SLC20A2Q08357 652 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 OVGP1Q12889 678 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 SYCP1Q15431 976 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 SETMARQ53H47 684 aaPredicted RBP11.81□□□□□ -0.52
SSH2-208ENST00000579040 RETSATQ6NUM9 610 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 C22orf39Q6P5X5 142 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 STRADAQ7RTN6 431 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 SLCO6A1Q86UG4 719 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 OXR1Q8N573 874 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 EMC1Q8N766 993 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 MFSD2AQ8NA29 543 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 OR2A12Q8NGT7 310 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 ZCCHC14Q8WYQ9 949 aaKnown RBP11.81□□□□□ -0.52
SSH2-208ENST00000579040 ERGIC2Q96RQ1 377 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 C11orf70Q9BRQ4 267 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 CEP44Q9C0F1 390 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 ERVMER34-1Q9H9K5 563 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 TMPRSS4Q9NRS4 437 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 TOR4AQ9NXH8 423 aa11.81□□□□□ -0.52
SSH2-208ENST00000579040 TDRD6O60522 2096 aaKnown RBP11.8□□□□□ -0.52
SSH2-208ENST00000579040 ANKRD11Q6UB99 2663 aaPredicted RBP11.8□□□□□ -0.52
SSH2-208ENST00000579040 FAM170AA1A519 330 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 C2CD4BA6NLJ0 364 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 TLR4O00206 839 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 PLK4O00444 970 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 KCNK3O14649 394 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 BNIP3LO60238 219 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 CALB1P05937 261 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 CTSLP07711 333 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 ATXN1LP0C7T5 689 aaKnown RBP11.8□□□□□ -0.52
SSH2-208ENST00000579040 UNGP13051 313 aaPredicted RBP11.8□□□□□ -0.52
SSH2-208ENST00000579040 RRM1P23921 792 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 ADRA1BP35368 520 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 RECQLP46063 649 aaPredicted RBP11.8□□□□□ -0.52
SSH2-208ENST00000579040 MAPKAPK2P49137 400 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 SERPINH1P50454 418 aaKnown RBP11.8□□□□□ -0.52
SSH2-208ENST00000579040 NXPH1P58417 271 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 GNA12Q03113 381 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 UBXN1Q04323 297 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 PTP4A2Q12974 167 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 CCDC183Q5T5S1 534 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 PIP5KL1Q5T9C9 394 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 MANEALQ5VSG8 457 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 NEK5Q6P3R8 708 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 PHF13Q86YI8 300 aaPredicted RBP11.8□□□□□ -0.52
SSH2-208ENST00000579040 PCDH20Q8N6Y1 951 aaKnown RBP11.8□□□□□ -0.52
SSH2-208ENST00000579040 PNPLA1Q8N8W4 532 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 OR7D4Q8NG98 312 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 SLC30A5Q8TAD4 765 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 RXFP2Q8WXD0 754 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 CENPIQ92674 756 aaPredicted RBP11.8□□□□□ -0.52
SSH2-208ENST00000579040 PPP1R16AQ96I34 528 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 PCMTD1Q96MG8 357 aaPredicted RBP11.8□□□□□ -0.52
SSH2-208ENST00000579040 OSBPL2Q9H1P3 480 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 ATP13A1Q9HD20 1204 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 DYRK4Q9NR20 520 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 ARHGAP20Q9P2F6 1191 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 FTSJ1Q9UET6 329 aa11.8□□□□□ -0.52
SSH2-208ENST00000579040 OR12D3Q9UGF7 316 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms