RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ZDHHC17Q8IUH5 632 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 TMCO5AQ8N6Q1 288 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 CCDC185Q8N715 623 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 SPATA22Q8NHS9 363 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 PCDH19Q8TAB3 1148 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 DTNBP1Q96EV8 351 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 LENG8Q96PV6 779 aaPredicted RBP12.21□□□□□ -0.45
ERBB2-206ENST00000578373 ACTR8Q9H981 624 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
ERBB2-206ENST00000578373 FBXO5Q9UKT4 447 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 CXorf49A8MYA2 514 aaPredicted RBP12.21□□□□□ -0.45
ERBB2-206ENST00000578373 TK2O00142 265 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 DAB1O75553 588 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 ZNF460Q14592 562 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 MAPRE1Q15691 268 aaKnown RBP12.21□□□□□ -0.45
ERBB2-206ENST00000578373 CYP1B1Q16678 543 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 TIGD7Q6NT04 549 aaPredicted RBP12.21□□□□□ -0.45
ERBB2-206ENST00000578373 RBM44Q6ZP01 1051 aaKnown RBP12.21□□□□□ -0.45
ERBB2-206ENST00000578373 TTC30AQ86WT1 665 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 KBTBD2Q8IY47 623 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 PTGR2Q8N8N7 351 aaPredicted RBP12.21□□□□□ -0.45
ERBB2-206ENST00000578373 GLMNQ92990 594 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 LIMD1Q9UGP4 676 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 RGSL1A5PLK6 1076 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 RGS5O15539 181 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 MSI1O43347 362 aaKnown RBP12.21□□□□□ -0.46
ERBB2-206ENST00000578373 STRNO43815 780 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 TBX10O75333 385 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 CILPO75339 1184 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 TMCC1O94876 653 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 SOAT1P35610 550 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 CHN2P52757 468 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 OXCT1P55809 520 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 IL5RAQ01344 420 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 ACVR2BQ13705 512 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 DGCR6Q14129 220 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 ANKS6Q68DC2 871 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 MARK2Q7KZI7 788 aaKnown RBP12.21□□□□□ -0.46
ERBB2-206ENST00000578373 RRM2BQ7LG56 351 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 MPP5Q8N3R9 675 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 MTFMTQ96DP5 389 aaKnown RBP12.21□□□□□ -0.46
ERBB2-206ENST00000578373 C1orf50Q9BV19 199 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 IL22Q9GZX6 179 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 CLPBQ9H078 707 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 SPON1Q9HCB6 807 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 ARHGEF3Q9NR81 526 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 LGALS13Q9UHV8 139 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 TRHDEQ9UKU6 1024 aa12.21□□□□□ -0.46
ERBB2-206ENST00000578373 PAIP2BQ9ULR5 123 aaKnown RBP12.21□□□□□ -0.46
ERBB2-206ENST00000578373 ZMYND8Q9ULU4 1186 aaPredicted RBP12.21□□□□□ -0.46
ERBB2-206ENST00000578373 NFASCO94856 1347 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 SIN3BO75182 1162 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 H2AFYO75367 372 aaKnown RBP12.2□□□□□ -0.46
ERBB2-206ENST00000578373 CKMP06732 381 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 HSMCR30P0CW71 290 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 MZF1P28698 734 aaPredicted RBP12.2□□□□□ -0.46
ERBB2-206ENST00000578373 IFNA8P32881 189 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 GABRB2P47870 512 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 KLF10Q13118 480 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 GK5Q6ZS86 529 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 FBXO30Q8TB52 745 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 SMARCD1Q96GM5 515 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 HBEGFQ99075 208 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 SIKE1Q9BRV8 207 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 MMADHCQ9H3L0 296 aaPredicted RBP12.2□□□□□ -0.46
ERBB2-206ENST00000578373 ABHD16BQ9H3Z7 469 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 BPIFA1Q9NP55 256 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 VPS45Q9NRW7 570 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 SYNPO2Q9UMS6 1093 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 SLC12A4Q9UP95 1085 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 AP4B1Q9Y6B7 739 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 MED1Q15648 1581 aaPredicted RBP12.2□□□□□ -0.46
ERBB2-206ENST00000578373 KANSL1LA0AUZ9 987 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 SLC2A3P11169 496 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 PEX2P28328 305 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 MATKP42679 507 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 BRCC3P46736 316 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 WASHC5Q12768 1159 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 OLIG2Q13516 323 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 MFSD10Q14728 455 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 SYTL3Q4VX76 610 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 DDX53Q86TM3 631 aaKnown RBP12.2□□□□□ -0.46
ERBB2-206ENST00000578373 RAET1EQ8TD07 263 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 ZC3H15Q8WU90 426 aaKnown RBP12.2□□□□□ -0.46
ERBB2-206ENST00000578373 AGAP2Q99490 1192 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 DMAP1Q9NPF5 467 aaPredicted RBP12.2□□□□□ -0.46
ERBB2-206ENST00000578373 MYRFQ9Y2G1 1151 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 TELO2Q9Y4R8 837 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 HACD1B0YJ81 288 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 DPYSL4O14531 572 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 DEAF1O75398 565 aaPredicted RBP12.2□□□□□ -0.46
ERBB2-206ENST00000578373 PGK1P00558 417 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 LSM3P62310 102 aaKnown RBP12.2□□□□□ -0.46
ERBB2-206ENST00000578373 POLD3Q15054 466 aaPredicted RBP12.2□□□□□ -0.46
ERBB2-206ENST00000578373 C6orf89Q6UWU4 347 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 C16orf59Q7L2K0 433 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 HEATR4Q86WZ0 1026 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 MYO1HQ8N1T3 1032 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 APBB2Q92870 758 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 GPR20Q99678 358 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms