RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 PTPRN2Q92932 1015 aa12.96□□□□□ -0.33
CSNK1D-207ENST00000578194 LOXL4Q96JB6 756 aa12.96□□□□□ -0.33
CSNK1D-207ENST00000578194 ZC3H10Q96K80 434 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-207ENST00000578194 ITM2CQ9NQX7 267 aa12.96□□□□□ -0.33
CSNK1D-207ENST00000578194 USP36Q9P275 1121 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-207ENST00000578194 NCDNQ9UBB6 729 aa12.96□□□□□ -0.33
CSNK1D-207ENST00000578194 CYP8B1Q9UNU6 501 aa12.96□□□□□ -0.33
CSNK1D-207ENST00000578194 NCKAP1Q9Y2A7 1128 aa12.96□□□□□ -0.33
CSNK1D-207ENST00000578194 DCLK1O15075 740 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 BUB1O43683 1085 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 SPOPO43791 374 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 NDUFS2O75306 463 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 ADH1BP00325 375 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 MT-CO1P00395 513 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 C7P10643 843 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 GLDCP23378 1020 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 ARF5P84085 180 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 SERINC3Q13530 473 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 PLK5Q496M5 336 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 LRRC38Q5VT99 294 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 FAM46CQ5VWP2 391 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 C11orf63Q6NUN7 778 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 C22orf39Q6P5X5 142 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 Q6ZVU0 165 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 LPCAT2Q7L5N7 544 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 KBTBD6Q86V97 674 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 CACUL1Q86Y37 369 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 CPNE8Q86YQ8 564 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 RHOT1Q8IXI2 618 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 STK40Q8N2I9 435 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 PCDH20Q8N6Y1 951 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 ACRBPQ8NEB7 543 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 FAM71BQ8TC56 605 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 TSC1Q92574 1164 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 ANP32BQ92688 251 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 HMCESQ96FZ2 354 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 CSPG4P5Q96PW8 444 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 HINFPQ9BQA5 517 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 ZNF670Q9BS34 389 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 CALN1Q9BXU9 219 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 NOL6Q9H6R4 1146 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 LRRC19Q9H756 370 aa12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 DDX56Q9NY93 547 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-207ENST00000578194 IGHV1OR15-9A0A0B4J2B8 117 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 BTNL10A8MVZ5 291 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 C1QTNF3-AMACRE9PGA6 284 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 K7ERQ8 282 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 MCF2LO15068 1137 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 PJA2O43164 708 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 SMAD6O43541 496 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 BNIP3LO60238 219 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 BUB1BO60566 1050 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 IGLV3-19P01714 112 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 RETP07949 1114 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 VAV1P15498 845 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 C5AR1P21730 350 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 BCKDHBP21953 392 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 COMTP21964 271 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 AMPD1P23109 780 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 CD6P30203 668 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 SLC8A1P32418 973 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 PSMD8P48556 350 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 MRE11P49959 708 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 TPMTP51580 245 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 NAP1L1P55209 391 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 RPL6Q02878 288 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 KIF5AQ12840 1032 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 CST6Q15828 149 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 LPAL2Q16609 132 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 IFI16Q16666 785 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 SPDYCQ5MJ68 293 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 PMS2CLQ68D20 193 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 ASCL5Q7RTU5 278 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 MMAAQ8IVH4 418 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 GANCQ8TET4 914 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 RUBCNQ92622 972 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 ISG20Q96AZ6 181 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 CELF6Q96J87 481 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 SLC39A8Q9C0K1 460 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 DUSP15Q9H1R2 295 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 PABPC3Q9H361 631 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 REXO2Q9Y3B8 237 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 SHROOM3Q8TF72 1996 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 ABCA7Q8IZY2 2146 aa12.94□□□□□ -0.34
CSNK1D-207ENST00000578194 TNRC6BQ9UPQ9 1833 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 LRRD1A4D1F6 860 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 ZNF487B1APH4 448 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 DFFAO00273 331 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 ARHGAP6O43182 974 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 PSTPIP1O43586 416 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 EPN2O95208 641 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 IL1BP01584 269 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 PRNPP04156 253 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 KRT1P04264 644 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 DPP6P42658 865 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 DHPSP49366 369 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 PAPOLAP51003 745 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 DNA2P51530 1060 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 ARSEP51690 589 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 SNRPD1P62314 119 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms