RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 PIP4K2CQ8TBX8 421 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 SAP25Q8TEE9 199 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 SLC6A18Q96N87 628 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 GBP4Q96PP9 640 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 PSMB7Q99436 277 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 HDAC8Q9BY41 377 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 SIK2Q9H0K1 926 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 MUC3BQ9H195 1237 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 ANLNQ9NQW6 1124 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 COX16Q9P0S2 106 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 VPS51Q9UID3 782 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 SIK3Q9Y2K2 1263 aa14.85□□□□□ -0.03
SMARCE1-213ENST00000578044 TBC1D3DA0A087WVF3 549 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 TBC1D3IA0A087WXS9 549 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 TBC1D3EA0A087X179 549 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 TBC1D3KA0A087X1G2 549 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 TBC1D3FA6NER0 549 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 TBC1D3LB9A6J9 549 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 RIOK3O14730 519 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 ZMPSTE24O75844 475 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 CNTN5O94779 1100 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 WNT1P04628 370 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 MMEP08473 750 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 TBC1D3HP0C7X1 549 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 TFE3P19532 575 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 OR1E1P30953 314 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 ANP32AP39687 249 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 MAPKAPK2P49137 400 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 IRAK1P51617 712 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 GEMIN4P57678 1058 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 ILKQ13418 452 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 ACCSLQ4AC99 568 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 KCNT1Q5JUK3 1230 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 MANEALQ5VSG8 457 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 SFMBT2Q5VUG0 894 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 TBC1D3GQ6DHY5 549 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 TBC1D3CQ6IPX1 549 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 PPP1R2P3Q6NXS1 205 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 Q6ZVU0 165 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 PROSER1Q86XN7 944 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 TBC1D3Q8IZP1 549 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 PCDH20Q8N6Y1 951 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 ZCCHC14Q8WYQ9 949 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 NTAN1Q96AB6 310 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 IFT43Q96FT9 208 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 LRIG1Q96JA1 1093 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 SERAC1Q96JX3 654 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 ERGIC2Q96RQ1 377 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 ZYG11BQ9C0D3 744 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 ANO10Q9NW15 660 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 LIMA1Q9UHB6 759 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 SARDHQ9UL12 918 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 ITPR1Q14643 2758 aa14.84□□□□□ -0.03
SMARCE1-213ENST00000578044 FAM47DPA6NHR8 397 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 C2CD4BA6NLJ0 364 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 SRRM3A6NNA2 597 aaPredicted RBP14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 PES1O00541 588 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 UNGP13051 313 aaPredicted RBP14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 VAV1P15498 845 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 CHRNA3P32297 505 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 ADRA1BP35368 520 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 STAT1P42224 750 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 AIF1P55008 147 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 RNASE9P60153 205 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 FMO1Q01740 532 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 SCAPQ12770 1279 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 CNTN1Q12860 1018 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 PIP5KL1Q5T9C9 394 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 NAA35Q5VZE5 725 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 TRNP1Q6NT89 227 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 TMPRSS12Q86WS5 348 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 PHF13Q86YI8 300 aaPredicted RBP14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 DCP2Q8IU60 420 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 ATP11CQ8NB49 1132 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 TMEM145Q8NBT3 493 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 PPP1R16AQ96I34 528 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 AASDHPPTQ9NRN7 309 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 BTBD3Q9Y2F9 522 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 NBEAQ8NFP9 2946 aa14.83□□□□□ -0.04
SMARCE1-213ENST00000578044 ATRXP46100 2492 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 LGALS16A8MUM7 142 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 AP1G1O43747 822 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 MT-CO1P00395 513 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 ATXN1LP0C7T5 689 aaKnown RBP14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 CCDC172P0C7W6 258 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 ZNF18P17022 549 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 CHRNB2P17787 502 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 EPHA8P29322 1005 aaPredicted RBP14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 SDC4P31431 198 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 RECQLP46063 649 aaPredicted RBP14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 SERPINH1P50454 418 aaKnown RBP14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 TAS2R38P59533 333 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 POLR2FP61218 127 aaKnown RBP14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 MYL5Q02045 173 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 PTP4A2Q12974 167 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 SHBQ15464 509 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 C22orf39Q6P5X5 142 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 KANSL1Q7Z3B3 1105 aa14.82□□□□□ -0.04
SMARCE1-213ENST00000578044 ASB12Q8WXK4 309 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms