RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 CREB5Q02930 508 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 TCEAL1Q15170 157 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 SMTNL2Q2TAL5 461 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 PPP6R3Q5H9R7 873 aaPredicted RBP19.74■□□□□ 0.75
SS18-208ENST00000577751 RFX8Q6ZV50 586 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 Q6ZVU0 165 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 USP30Q70CQ3 517 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 SLC41A1Q8IVJ1 513 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 CCDC170Q8IYT3 715 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 SLC35G2Q8TBE7 412 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 CEP44Q9C0F1 390 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 KLC2Q9H0B6 622 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 PABPC3Q9H361 631 aaKnown RBP19.74■□□□□ 0.75
SS18-208ENST00000577751 LRRC19Q9H756 370 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 SEMA4GQ9NTN9 838 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 CWC15Q9P013 229 aaKnown RBP19.74■□□□□ 0.75
SS18-208ENST00000577751 NDUFS2O75306 463 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 ZNF806P0C7X5 589 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 ERCC2P18074 760 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 MPLP40238 635 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 ZNF33AQ06730 810 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 PARP15Q460N3 678 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 TTC31Q49AM3 519 aaPredicted RBP19.73■□□□□ 0.75
SS18-208ENST00000577751 PEAR1Q5VY43 1037 aaPredicted RBP19.73■□□□□ 0.75
SS18-208ENST00000577751 RHOT2Q8IXI1 618 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 KIAA2013Q8IYS2 634 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 CADM4Q8NFZ8 388 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 OR2A12Q8NGT7 310 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 FAM71BQ8TC56 605 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 OR8D1Q8WZ84 308 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 ZWILCHQ9H900 591 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.73■□□□□ 0.75
SS18-208ENST00000577751 PPM1HQ9ULR3 514 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 HPCAL4Q9UM19 191 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 ACTL7AQ9Y615 435 aa19.73■□□□□ 0.75
SS18-208ENST00000577751 RASA4BC9J798 803 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 MID1O15344 667 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 RASA4O43374 803 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 ADH1BP00325 375 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 C5AR1P21730 350 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 ACSL1P33121 698 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 MAN1A1P33908 653 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 NDST2P52849 883 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 GEMIN4P57678 1058 aaKnown RBP19.72■□□□□ 0.75
SS18-208ENST00000577751 SERINC3Q13530 473 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 DPYSQ14117 519 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 HADHQ16836 314 aaKnown RBP19.72■□□□□ 0.75
SS18-208ENST00000577751 LYSMD4Q5XG99 296 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 AFMIDQ63HM1 303 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 C22orf39Q6P5X5 142 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 CYP2U1Q7Z449 544 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 POLNQ7Z5Q5 900 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 DSG4Q86SJ6 1040 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 CPNE8Q86YQ8 564 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 PLPP6Q8IY26 295 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 DEFB119Q8N690 84 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 PCDH20Q8N6Y1 951 aaKnown RBP19.72■□□□□ 0.75
SS18-208ENST00000577751 RFFLQ8WZ73 363 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 HSPH1Q92598 858 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 ISG20Q96AZ6 181 aaKnown RBP19.72■□□□□ 0.75
SS18-208ENST00000577751 HMCESQ96FZ2 354 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 GPR174Q9BXC1 333 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 BTBD1Q9H0C5 482 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 VPS45Q9NRW7 570 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 FBXL12Q9NXK8 326 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 PILRBQ9UKJ0 227 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 SARDHQ9UL12 918 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 NCKAP1Q9Y2A7 1128 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 NUMA1Q14980 2115 aa19.72■□□□□ 0.75
SS18-208ENST00000577751 ZSCAN5CA6NGD5 496 aaPredicted RBP19.71■□□□□ 0.75
SS18-208ENST00000577751 H3BRJ5 948 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 DAPK3O43293 454 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 IL1BP01584 269 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 ARHGAP25P42331 645 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 DPP6P42658 865 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 MAGEA1P43355 309 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 SFSWAPQ12872 951 aaKnown RBP19.71■□□□□ 0.75
SS18-208ENST00000577751 CCDC6Q16204 474 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 PRR23CQ6ZRP0 262 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 ARMCX6Q7L4S7 300 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 FAM124AQ86V42 546 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 TMTC1Q8IUR5 882 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 SYT12Q8IV01 421 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 AADATQ8N5Z0 425 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 TSC1Q92574 1164 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 FOXJ1Q92949 421 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 FAM131CQ96AQ9 280 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 CCDC114Q96M63 670 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 PCED1AQ9H1Q7 454 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 SGK2Q9HBY8 427 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 PCDH18Q9HCL0 1135 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 TMEM74BQ9NUR3 256 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 IMPACTQ9P2X3 320 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 SERGEFQ9UGK8 458 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 FZD4Q9ULV1 537 aa19.71■□□□□ 0.75
SS18-208ENST00000577751 FCF1Q9Y324 198 aaKnown RBP19.71■□□□□ 0.75
SS18-208ENST00000577751 A0A1W2PP55 124 aa19.7■□□□□ 0.74
SS18-208ENST00000577751 METTL12A8MUP2 240 aa19.7■□□□□ 0.74
SS18-208ENST00000577751 C10orf142B7Z368 130 aa19.7■□□□□ 0.74
SS18-208ENST00000577751 FOXD2O60548 495 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms