RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 DDI1Q8WTU0 396 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 OLFM3Q96PB7 478 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TSGA13Q96PP4 275 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NELL2Q99435 816 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ACE2Q9BYF1 805 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 L2HGDHQ9H9P8 463 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NDFIP2Q9NV92 336 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 KLHL11Q9NVR0 708 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 DTLQ9NZJ0 730 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 GPSM3Q9Y4H4 160 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MRFAP1Q9Y605 127 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PGRMC1O00264 195 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TRDMT1O14717 391 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TSPAN3O60637 253 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ADH5P11766 374 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ARSAP15289 507 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MX2P20592 715 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ETFBP38117 255 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 GGCXP38435 758 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 GALNT2Q10471 571 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 DMC1Q14565 340 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 UBXN2BQ14CS0 331 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 WHAMMP3Q1A5X7 153 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ITPRIPL2Q3MIP1 535 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 STPG1Q5TH74 334 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TRIM68Q6AZZ1 485 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RFX6Q8HWS3 928 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PHTF2Q8N3S3 785 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CPA6Q8N4T0 437 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 C12orf50Q8NA57 414 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SLC35B2Q8TB61 432 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 P3H4Q92791 437 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CHFRQ96EP1 664 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MSANTD3Q96H12 275 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MS4A14Q96JA4 679 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 BBC3Q96PG8 261 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 XPO6Q96QU8 1125 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PSMB7Q99436 277 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 FEM1AQ9BSK4 669 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 BBS2Q9BXC9 721 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 HEMGNQ9BXL5 484 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 EBF3Q9H4W6 596 aa11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 KIAA1522Q9P206 1035 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 DRG1Q9Y295 367 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TCRBV7S2A1N4TA0A589 114 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HACD1B0YJ81 288 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PDE2AO00408 941 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TIMM44O43615 452 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 URI1O94763 535 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ZNF806P0C7X5 589 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CCNCP24863 283 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GJA4P35212 333 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PAFAH1B1P43034 410 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PFKPQ01813 784 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GNA12Q03113 381 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GBE1Q04446 702 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TNK2Q07912 1038 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MTAPQ13126 283 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SERINC3Q13530 473 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GRM2Q14416 872 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NOMO1Q15155 1222 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 LONRF2Q1L5Z9 754 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PREPLQ4J6C6 727 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 AASDHQ4L235 1098 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SLC44A4Q53GD3 710 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 FSCBQ5H9T9 825 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PSAPL1Q6NUJ1 521 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 C1orf228Q6PIY5 440 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TPGS1Q6ZTW0 290 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NPWQ8N729 165 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 OR52K2Q8NGK3 314 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ARHGEF2Q92974 986 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TTC17Q96AE7 1141 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HDAC11Q96DB2 347 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ZFYVE19Q96K21 471 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SCNM1Q9BWG6 230 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SLC39A8Q9C0K1 460 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 C8orf33Q9H7E9 229 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 BRD9Q9H8M2 597 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CLEC4EQ9ULY5 219 aa11.39□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NUP205Q92621 2012 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 BCLAF3A2AJT9 711 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NEDD8-MDP1E9PL57 170 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 H0Y626 953 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CCDC188H7C350 402 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SCAMP3O14828 347 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 KDELR3O43731 214 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MAFKO60675 156 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RAMP2O60895 175 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ZMPSTE24O75844 475 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CAPNS1P04632 268 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SPINK2P20155 84 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TARSP26639 723 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HLA-FP30511 346 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 STIP1P31948 543 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CNR2P34972 360 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 OPRD1P41143 372 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GARSP41250 739 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 DNA2P51530 1060 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms