RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 VPS26AO75436 327 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ATP6AP2O75787 350 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZBTB11O95625 1053 aaPredicted RBP13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 POC5Q8NA72 575 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 MTERF3Q96E29 417 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ASIC4Q96FT7 647 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ASB2Q96Q27 587 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 VAT1Q99536 393 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 HPS4Q9NQG7 708 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 TUBGCP4Q9UGJ1 667 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 COQ6Q9Y2Z9 468 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 RGL2O15211 777 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 LZTS3O60299 673 aaPredicted RBP13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 NRP2O60462 931 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 H6PDO95479 791 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 GLP2RO95838 553 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 S100A1P23297 94 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 RALGDSQ12967 914 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 DCAF4L1Q3SXM0 396 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 NEPROQ6NW34 567 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 SPATA2LQ8IUW3 424 aaPredicted RBP13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 FBXO39Q8N4B4 442 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 UBR7Q8N806 425 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 APOL4Q9BPW4 351 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ATXN3LQ9H3M9 355 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ST6GALNAC4Q9H4F1 302 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZFYVE28Q9HCC9 887 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 PCDH18Q9HCL0 1135 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 KLK14Q9P0G3 267 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 DYTNA2CJ06 578 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 MYL3P08590 195 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 CD48P09326 243 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ALOX5P09917 674 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZNF12P17014 697 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 LRRC74AQ0VAA2 488 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 PPIL2Q13356 520 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 NOTUMQ6P988 496 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 PDSS2Q86YH6 399 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZNRF3Q9ULT6 936 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 SYNPO2Q9UMS6 1093 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 COQ4Q9Y3A0 265 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 RAD51BO15315 384 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ATG7O95352 703 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 TFEBP19484 476 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 TPSB2P20231 275 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 TNFSF9P41273 254 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ABL2P42684 1182 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ADIGQ0VDE8 80 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 TPSAB1Q15661 275 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ERI1Q8IV48 349 aaKnown RBP13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 PLD5Q8N7P1 536 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 CNTD1Q8N815 330 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 GLIS1Q8NBF1 620 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 PSMA8Q8TAA3 256 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 DEPDC7Q96QD5 511 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 TXLNGYQ9BZA5 131 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 RIBC2Q9H4K1 309 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 A0A087WZ62 844 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 VPS4BO75351 444 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 TKTL1P51854 596 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 SFT2D3Q587I9 215 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 RRM2BQ7LG56 351 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 VPS37AQ8NEZ2 397 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 FDXACB1Q9BRP7 624 aaPredicted RBP13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 PRDM16Q9HAZ2 1276 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 VTA1Q9NP79 307 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 RGS18Q9NS28 235 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 C4BPAP04003 597 aaKnown RBP13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 GPX6P59796 221 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 FSTL1Q12841 308 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 DDR2Q16832 855 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 NAT8LQ8N9F0 302 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 SLC35B2Q8TB61 432 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 LRTOMTQ8WZ04 291 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 MRPL57Q9BQC6 102 aaKnown RBP13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 WDR12Q9GZL7 423 aaKnown RBP13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 RMND5AQ9H871 391 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 TBC1D13Q9NVG8 400 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 WWOXQ9NZC7 414 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 HNRNPCL2B2RXH8 293 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 FBXO21O94952 628 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 HMBSP08397 361 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 LTA4HP09960 611 aaKnown RBP13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 STX19Q8N4C7 294 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZNF781Q8N8C0 355 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 PAWRQ96IZ0 340 aaKnown RBP13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 PHF12Q96QT6 1004 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 CPXM1Q96SM3 734 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 COQ10BQ9H8M1 238 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 TMEM216Q9P0N5 145 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 FAM198AQ9UFP1 575 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 DSEQ9UL01 958 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 PCDHB12Q9Y5F1 795 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 MYH6P13533 1939 aa13.29□□□□□ -0.28
PCDHGB3-201ENST00000576222 TTLL13PA6NNM8 815 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 H3BSA7 217 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 KLF11O14901 512 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 TYROBPO43914 113 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 MSH3P20585 1137 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 RAB10P61026 200 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms