RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PLD2O14939 933 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 ALOX15BO15296 676 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 APOEP02649 317 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 NME1P15531 152 aaKnown RBP16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 PLK1P53350 603 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 CCDC15Q0P6D6 951 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 CUL2Q13617 745 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 SPIDRQ14159 915 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 TBR1Q16650 682 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 FBXO39Q8N4B4 442 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 RNF34Q969K3 372 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 FAM149B1Q96BN6 582 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 PAGE5Q96GU1 130 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 SEMA3CQ99985 751 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 DYRK4Q9NR20 520 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 KLF15Q9UIH9 416 aa16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 UTP20O75691 2785 aaKnown RBP16.7■□□□□ 0.26
CTDNEP1-211ENST00000575783 SPTY2D1-AS1A0A0U1RR47 76 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 PPFIA2O75334 1257 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 PAK4O96013 591 aaPredicted RBP16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 CTSLP07711 333 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 JUNDP17535 347 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 RPL13P26373 211 aaKnown RBP16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 RPIAP49247 311 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 PDX1P52945 283 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 CYP4F2P78329 520 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 ENPEPQ07075 957 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 C4orf17Q53FE4 359 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 LCLAT1Q6UWP7 414 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 TAC4Q86UU9 113 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 PARGQ86W56 976 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 FAM174AQ8TBP5 190 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 TFAP2BQ92481 460 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 CCDC3Q9BQI4 270 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 EPB41L5Q9HCM4 733 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 FOXD4L1Q9NU39 408 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 KIAA1257Q9ULG3 409 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 FARP1Q9Y4F1 1045 aaPredicted RBP16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 PCDHGA7Q9Y5G6 932 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 HS3ST3A1Q9Y663 406 aa16.69■□□□□ 0.26
CTDNEP1-211ENST00000575783 NBPF19A0A087WUL8 3843 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 NOTCH2Q04721 2471 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 M0QYV0 167 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 FBXO21O94952 628 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 YEATS4O95619 227 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 HGFP14210 728 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 CHRNA3P32297 505 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 UGT1A5P35504 534 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 ME1P48163 572 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 LRMPQ12912 555 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 NNTQ13423 1086 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 PDE1CQ14123 709 aaPredicted RBP16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 SYPL2Q5VXT5 272 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 CXorf57Q6NSI4 855 aaKnown RBP16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 RAB11FIP2Q7L804 512 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 PTRH1Q86Y79 214 aaKnown RBP16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 WDR48Q8TAF3 677 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 GLMNQ92990 594 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 BTN2A3PQ96KV6 586 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 PPP1R9BQ96SB3 815 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 FEM1AQ9BSK4 669 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 SLC17A9Q9BYT1 436 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 SLC25A18Q9H1K4 315 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 VPS28Q9UK41 221 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 MYO9AB2RTY4 2548 aa16.68■□□□□ 0.26
CTDNEP1-211ENST00000575783 RNF103O00237 685 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 AGRPO00253 132 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 RIOK3O14730 519 aaKnown RBP16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 TPP1O14773 563 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 RAD51BO15315 384 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 STX10O60499 249 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 CR2P20023 1033 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 VASPP50552 380 aaPredicted RBP16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 OXCT1P55809 520 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 YWHAEP62258 255 aaKnown RBP16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 C1orf61Q13536 156 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 NFIL3Q16649 462 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 TMEM259Q4ZIN3 620 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 MANEAQ5SRI9 462 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 RESP18Q5W5W9 173 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 KYAT3Q6YP21 454 aaKnown RBP16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 ERN2Q76MJ5 926 aaKnown RBP16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 B3GNT8Q7Z7M8 397 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 VASH2Q86V25 355 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 SLC35F3Q8IY50 421 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 SH2D3CQ8N5H7 860 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 ZSCAN1Q8NBB4 408 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 NAT6Q93015 286 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 ALG14Q96F25 216 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 LIN37Q96GY3 246 aaPredicted RBP16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 PPP1R13BQ96KQ4 1090 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 HSFY1Q96LI6 401 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 SEPT10Q9P0V9 454 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 SLC12A6Q9UHW9 1150 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 PCDHA7Q9UN72 937 aa16.67■□□□□ 0.26
CTDNEP1-211ENST00000575783 TDRD6O60522 2096 aaKnown RBP16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 DOCK9Q9BZ29 2069 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 TCAF2A6NFQ2 919 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms