RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 GPC3P51654 580 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 MRPL12P52815 198 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 RABGGTBP53611 331 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 STARD6P59095 220 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 PRAMEP78395 509 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 AKAP17AQ02040 695 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 SLFN5Q08AF3 891 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 LRRC74AQ0VAA2 488 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 CRHR2Q13324 411 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 MTA1Q13330 715 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 SF3B3Q15393 1217 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 SLC9B1Q4ZJI4 515 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 USP39Q53GS9 565 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 ZNF569Q5MCW4 686 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 UBAP2Q5T6F2 1119 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 MSANTD2Q6P1R3 559 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 TMEM154Q6P9G4 183 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 DOK3Q7L591 496 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 PPP1R42Q7Z4L9 355 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 SPRED1Q7Z699 444 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 TUSC5Q8IXB3 177 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 GSPT2Q8IYD1 628 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 SPATA20Q8TB22 786 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 POMGNT1Q8WZA1 660 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 EXTL1Q92935 676 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 BICD1Q96G01 975 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 MASTLQ96GX5 879 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 PDLIM5Q96HC4 596 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 CPPED1Q9BRF8 314 aaPredicted RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 NAA11Q9BSU3 229 aaPredicted RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 NDC1Q9BTX1 674 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 GPR87Q9BY21 358 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 C1orf21Q9H246 121 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 PNNQ9H307 717 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 CCDC134Q9H6E4 229 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 TLR8Q9NR97 1041 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 SPATS2LQ9NUQ6 558 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 DDX43Q9NXZ2 648 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 MYRFQ9Y2G1 1151 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 ADAM18Q9Y3Q7 739 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 ENTPD2Q9Y5L3 495 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 POMT1Q9Y6A1 747 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 FPGT-TNNI3KV9GXZ4 949 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 SHANK2Q9UPX8 1470 aa5.17□□□□□ -1.58
TSR1-203ENST00000575049 ZNF644Q9H582 1327 aaPredicted RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 CENPJQ9HC77 1338 aaPredicted RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 URB2Q14146 1524 aaKnown RBP5.17□□□□□ -1.58
TSR1-203ENST00000575049 IQGAP2Q13576 1575 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 TROQ12816 1431 aaPredicted RBP5.16□□□□□ -1.58
TSR1-203ENST00000575049 ANKRD50Q9ULJ7 1429 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 CAMSAP2Q08AD1 1489 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 TEX22C9J3V5 150 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 GCOM1H8Y6P7 765 aaPredicted RBP5.16□□□□□ -1.58
TSR1-203ENST00000575049 STX6O43752 255 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 GCNT3O95395 438 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 PNPP00491 289 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 SNRPA1P09661 255 aaKnown RBP5.16□□□□□ -1.58
TSR1-203ENST00000575049 KRT13P13646 458 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 ACP5P13686 325 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 COX7A2P14406 83 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 HK1P19367 917 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 HOXA11P31270 313 aaPredicted RBP5.16□□□□□ -1.58
TSR1-203ENST00000575049 MCM7P33993 719 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 PNPLA4P41247 253 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 MTHFRP42898 656 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 TKTL1P51854 596 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 EIF3BP55884 814 aaKnown RBP5.16□□□□□ -1.58
TSR1-203ENST00000575049 TCF15Q12870 199 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 RPA4Q13156 261 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 RRP1BQ14684 758 aaKnown RBP5.16□□□□□ -1.58
TSR1-203ENST00000575049 CLCA4Q14CN2 919 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 ZXDCQ2QGD7 858 aaPredicted RBP5.16□□□□□ -1.58
TSR1-203ENST00000575049 TYSND1Q2T9J0 566 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 KBTBD12Q3ZCT8 623 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 DCAF17Q5H9S7 520 aaPredicted RBP5.16□□□□□ -1.58
TSR1-203ENST00000575049 MFSD14BQ5SR56 506 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 C1QL3Q5VWW1 255 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 RNF207Q6ZRF8 634 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 HTR3DQ70Z44 454 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 PPP1R32Q7Z5V6 425 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 ZER1Q7Z7L7 766 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 FAM83AQ86UY5 434 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 MON1AQ86VX9 555 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 XYLT1Q86Y38 959 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 ZNF280BQ86YH2 543 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.16□□□□□ -1.58
TSR1-203ENST00000575049 FAM217AQ8IXS0 508 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 PTGR2Q8N8N7 351 aaPredicted RBP5.16□□□□□ -1.58
TSR1-203ENST00000575049 RFWD2Q8NHY2 731 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 IL17DQ8TAD2 202 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 SETD6Q8TBK2 473 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 SLC2A12Q8TD20 617 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 DUSP19Q8WTR2 217 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 MR1Q95460 341 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 SCAMP4Q969E2 229 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 INTS12Q96CB8 462 aaKnown RBP5.16□□□□□ -1.58
TSR1-203ENST00000575049 TRIM44Q96DX7 344 aaPredicted RBP5.16□□□□□ -1.58
TSR1-203ENST00000575049 CCDC114Q96M63 670 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 WDFY2Q96P53 400 aa5.16□□□□□ -1.58
TSR1-203ENST00000575049 TESK2Q96S53 571 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms